CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400034190	Potato	cytosol	40.21	69.64
ATMG00480.1	Thale cress	extracellular	57.73	35.44
AT2G07707.1	Thale cress	extracellular	57.73	35.44
PGSC0003DMT400029511	Potato	extracellular	49.48	30.77
GRMZM5G816772_P01	Maize	extracellular	47.42	30.07
TraesCS2B01G265400.1	Wheat	extracellular, golgi	47.42	29.68
BAC19860	Rice	plasma membrane	47.42	29.68
HORVU6Hr1G039040.1	Barley	cytosol	38.14	29.37
VIT_01s0146g00390.t01	Wine grape	extracellular	47.42	28.93
TraesCS5A01G430400.1	Wheat	extracellular	46.39	28.85
TraesCS5A01G020100.1	Wheat	golgi	46.39	28.85
TraesCS3B01G430700.1	Wheat	endoplasmic reticulum, extracellular	45.36	28.39
VIT_00s0246g00220.t01	Wine grape	extracellular	46.39	28.3
TraesCS1A01G140100.1	Wheat	extracellular, golgi	45.36	28.21
TraesCSU01G245500.1	Wheat	extracellular	45.36	28.21
TraesCS2D01G230200.1	Wheat	extracellular, golgi	45.36	28.21
TraesCS7B01G051100.1	Wheat	endoplasmic reticulum, extracellular	45.36	28.21
TraesCS7A01G164600.1	Wheat	extracellular	45.36	28.21
BAV58133	Barley	endoplasmic reticulum, extracellular	44.33	27.56
TraesCS7D01G464300.1	Wheat	extracellular, vacuole	44.33	27.56
TraesCS6D01G168600.1	Wheat	extracellular, plasma membrane	44.33	27.56
HORVU7Hr1G089600.1	Barley	extracellular	44.33	27.56
TraesCS4B01G146500.1	Wheat	extracellular	44.33	27.56
TraesCS3D01G410500.1	Wheat	extracellular, plasma membrane	44.33	27.56
TraesCS3A01G142300.1	Wheat	extracellular, plasma membrane	44.33	27.56
TraesCS3D01G520800.1	Wheat	extracellular, vacuole	42.27	26.28
HORVU4Hr1G059430.1	Barley	extracellular, golgi	41.24	25.64
GSMUA_AchrUn_...	Banana	extracellular	41.24	24.84
KRH62975	Soybean	endoplasmic reticulum, mitochondrion	11.34	8.73
HORVU2Hr1G034000.1	Barley	cytosol	9.28	7.09
CDY65732	Canola	endoplasmic reticulum, extracellular, golgi	13.4	3.0

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	MapMan:35.1	GO:A0A078I5E2	UniProt:A0A078I5E2	EnsemblPlants:CDY45297
ProteinID:CDY45297	ProteinID:CDY45297.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006139	GO:GO:0006754	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0031966	GO:GO:0045263	EnsemblPlantsGene:GSBRNA2T00081743001	PFAM:PF06449	PANTHER:PTHR36816	MetaCyc:PWY-7219
UniParc:UPI0004EDDBB5	InterPro:YMF19	SEG:seg	:	:	:

Description

BnaA06g09670DBnaA06g09670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5E2]

Coordinates

chrLK032619:+:189513..190641

Molecular Weight (calculated)

11569.6 Da

IEP (calculated)

10.687

GRAVY (calculated)

-0.204

Length

97 amino acids

Sequence
(BLAST)

1: MKIYLLYKLN LSLVYLICML VYSKYPNGLR PSNYWEKKRK ITLISCSGEI NCSRKMKRNI LYISKSFPSH TGRWITCRRW RNDIMLIHVV HGQGSIK

Best Arabidopsis Sequence Match ( ATMG00480.1 )
(BLAST)

001: MPQLDKFTYF SQFFWLCLFF FTFYIFICND GDGVLGISRI LKLRNQLLSH RGKTIRSKDP NSLEDLLRKG FSTGVSYMYA SLFEVSQWCK AVDLLGKRRK
101: ITLISCFGEI SGSRGMERNI LYNISKSSPS NTGRWITCRN CRNDIMLIHV VHGQGSIK

Arabidopsis Description

YMF19Atp8 [Source:UniProtKB/TrEMBL;Acc:G1C2R4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.