Factsheet for VIT_01s0146g00390.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

mitochondrion 3
extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, secretory
BaCelLo:	mitochondrion
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0246g00220.t01	Wine grape	extracellular	98.74	98.74
PGSC0003DMT400029511	Potato	extracellular	89.31	91.03
PGSC0003DMT400034190	Potato	cytosol	29.56	83.93
AT2G07707.1	Thale cress	extracellular	83.02	83.54
ATMG00480.1	Thale cress	extracellular	83.02	83.54
GRMZM5G816772_P01	Maize	extracellular	75.47	78.43
BAC19860	Rice	plasma membrane	74.84	76.77
TraesCS2B01G265400.1	Wheat	extracellular, golgi	74.21	76.13
GSMUA_AchrUn_...	Banana	extracellular	76.73	75.78
TraesCSU01G245500.1	Wheat	extracellular	74.21	75.64
TraesCS5A01G020100.1	Wheat	golgi	74.21	75.64
TraesCS7D01G464300.1	Wheat	extracellular, vacuole	73.58	75.0
TraesCS5A01G430400.1	Wheat	extracellular	73.58	75.0
TraesCS2D01G230200.1	Wheat	extracellular, golgi	72.96	74.36
TraesCS1A01G140100.1	Wheat	extracellular, golgi	72.96	74.36
TraesCS3B01G430700.1	Wheat	endoplasmic reticulum, extracellular	72.33	74.19
TraesCS3A01G142300.1	Wheat	extracellular, plasma membrane	72.33	73.72
TraesCS7B01G051100.1	Wheat	endoplasmic reticulum, extracellular	72.33	73.72
BAV58133	Barley	endoplasmic reticulum, extracellular	72.33	73.72
TraesCS3D01G520800.1	Wheat	extracellular, vacuole	71.07	72.44
TraesCS4B01G146500.1	Wheat	extracellular	71.07	72.44
TraesCS6D01G168600.1	Wheat	extracellular, plasma membrane	71.07	72.44
TraesCS3D01G410500.1	Wheat	extracellular, plasma membrane	70.44	71.79
HORVU7Hr1G089600.1	Barley	extracellular	70.44	71.79
HORVU4Hr1G059430.1	Barley	extracellular, golgi	68.55	69.87
TraesCS7A01G164600.1	Wheat	extracellular	64.78	66.03
KRH62975	Soybean	endoplasmic reticulum, mitochondrion	51.57	65.08
HORVU6Hr1G039040.1	Barley	cytosol	47.8	60.32
CDY45297	Canola	extracellular	28.93	47.42
HORVU2Hr1G034000.1	Barley	cytosol	26.42	33.07
CDY65732	Canola	endoplasmic reticulum, extracellular, golgi	49.06	17.97
ATMG00500.1	Thale cress	mitochondrion	10.69	12.06
AT2G07708.1	Thale cress	mitochondrion	10.69	12.06

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	EntrezGene:100855199	wikigene:100855199	MapMan:2.4.6.1.6	EntrezGene:7498613
wikigene:7498613	ProteinID:ACS15203	ProteinID:ACS15203.1	UniProt:B6VJW7	ProteinID:CAQ77628	ProteinID:CAQ77628.1
ProteinID:CBI38179	ProteinID:CBI38179.3	EMBL:FM179380	EMBL:FN596513	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0016020	GO:GO:0016021	EMBL:GQ220323
EntrezGene:LOC100855199	wikigene:LOC100855199	PFAM:PF02326	PFAM:PF06449	PANTHER:PTHR36816	TMHMM:TMhelix
UniParc:UPI00015CCE6F	ArrayExpress:VIT_01s0146g00390	EnsemblPlantsGene:VIT_01s0146g00390	EnsemblPlants:VIT_01s0146g00390.t01	RefSeq:XP_003631362	RefSeq:XP_003631362.1
InterPro:YMF19	InterPro:YMF19-like_N	RefSeq:YP_002608379.1	EntrezGene:atp8	wikigene:atp8	SEG:seg

Description

ATPase subunit 8 [Source:UniProtKB/TrEMBL;Acc:B6VJW7]

Coordinates

chr1:+:22258668..22259400

Molecular Weight (calculated)

18033.7 Da

IEP (calculated)

8.478

GRAVY (calculated)

-0.003

Length

159 amino acids

Sequence
(BLAST)

001: MPQLDKFTYF TQFFWSCLFL FTFYIPICND GDGVLGISRI LKLRNQLVSH RGNNIRSNDP NSLEDILRKG FSTGVSYMYS SLFEVSQWCN AVDLLGKRSQ
101: ITLISCFGEI SGSRGMERNI FYLISKSSYS TSSNPGWGIT CRNDIMLIHV PHGQGSIVF

Best Arabidopsis Sequence Match ( ATMG00480.1 )
(BLAST)

001: MPQLDKFTYF SQFFWLCLFF FTFYIFICND GDGVLGISRI LKLRNQLLSH RGKTIRSKDP NSLEDLLRKG FSTGVSYMYA SLFEVSQWCK AVDLLGKRRK
101: ITLISCFGEI SGSRGMERNI LYNISKSSPS NTGRWITCRN CRNDIMLIHV VHGQGSIK

Arabidopsis Description

YMF19Atp8 [Source:UniProtKB/TrEMBL;Acc:G1C2R4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.