Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 7
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G044670.1 | Barley | cytosol | 38.27 | 43.66 |
| Solyc06g042990.1.1 | Tomato | mitochondrion, plastid | 33.33 | 39.71 |
| HORVU2Hr1G096060.1 | Barley | cytosol, extracellular | 37.04 | 31.91 |
| PGSC0003DMT400079466 | Potato | cytosol | 44.44 | 22.93 |
| TraesCS7A01G011000.1 | Wheat | cytosol | 49.38 | 21.05 |
| BAV58145 | Barley | cytosol | 49.38 | 20.83 |
| TraesCS7A01G526300.1 | Wheat | mitochondrion | 49.38 | 20.83 |
| TraesCS7A01G099300.1 | Wheat | golgi, unclear | 49.38 | 20.83 |
| TraesCS4D01G236200.1 | Wheat | golgi, plastid, unclear | 49.38 | 20.83 |
| HORVU3Hr1G050700.1 | Barley | cytosol | 49.38 | 20.83 |
| TraesCS4B01G147700.1 | Wheat | mitochondrion | 49.38 | 20.83 |
| TraesCS6B01G232700.1 | Wheat | cytosol | 48.15 | 20.31 |
| BAC19854 | Rice | plasma membrane | 49.38 | 20.3 |
| TraesCS7B01G194300.1 | Wheat | cytosol | 46.91 | 19.79 |
| TraesCS3A01G491800.1 | Wheat | cytosol | 46.91 | 19.79 |
| CDY45530 | Canola | endoplasmic reticulum | 45.68 | 19.27 |
| TraesCS6B01G233300.1 | Wheat | cytosol | 46.91 | 19.19 |
| KRH04770 | Soybean | mitochondrion | 45.68 | 18.97 |
| ATMG00640.1 | Thale cress | extracellular | 44.44 | 18.75 |
| GRMZM5G884912_P01 | Maize | plasma membrane, plastid | 50.62 | 18.72 |
| CDY17569 | Canola | extracellular | 45.68 | 17.62 |
| PGSC0003DMT400068212 | Potato | peroxisome, plasma membrane, plastid | 44.44 | 14.69 |
| CDX89718 | Canola | nucleus | 23.46 | 7.04 |
| Solyc02g021390.1.1 | Tomato | extracellular | 4.94 | 6.45 |
| KRH39429 | Soybean | extracellular | 1.23 | 1.01 |
| HORVU6Hr1G001790.1 | Barley | cytosol, peroxisome | 0.0 | 0.0 |
| HORVU5Hr1G072290.2 | Barley | cytosol | 0.0 | 0.0 |
| HORVU3Hr1G113900.1 | Barley | extracellular | 0.0 | 0.0 |
| HORVU3Hr1G045000.1 | Barley | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP19600_001 | EnsemblPlants:GSMUA_AchrUn_randomT19600_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG19600_001 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:G_patch_dom | InterPro:IPR000467 | PANTHER:PTHR37774 | PFAM:PF01585 | UniParc:UPI000295C2C7 | UniProt:M0UAL9 |
| MapMan:2.4.6.1.2 | : | : | : | : | : |
Description
25 kDa membrane protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG19600_001]
Coordinates
chrchrUn_random:+:94036501..94036911
Molecular Weight (calculated)
9012.9 Da
IEP (calculated)
10.048
GRAVY (calculated)
-0.168
Length
81 amino acids
Sequence
(BLAST)
(BLAST)
1: MARCAPKCQK TVQALFFRNL NVPAATLPNA TSSRLQDDLV TGWNFWLSEK FLPGSGLGRR NQGIVEPIHV QAIEPFGYIP K
001: MRLSITNMDG RKMLFAAILS ICALSSKKIS IYNEEMIVAL CFIGFIIFSR KSLGTTFKVT LDGSLQAIQE ESQQFPNPNE VVPPESNEQQ RLLRISLRIC
101: GTVVESLPMA RCAPKCEKTV QALLCRNLNV KSATLTNATS SRRIRFQDDL VTKFYTLVGK QFAYSCISKA ERVEFIRESL VVLRMVRGGV FS
101: GTVVESLPMA RCAPKCEKTV QALLCRNLNV KSATLTNATS SRRIRFQDDL VTKFYTLVGK QFAYSCISKA ERVEFIRESL VVLRMVRGGV FS
Arabidopsis Description
ORF25hydrogen ion transporting ATP synthases, rotational mechanism;zinc ion binding [Source:TAIR;Acc:ATMG00640]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.