CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 9
plastid 1

Predictors

GFP

MS/MS

Papers

endoplasmic reticulum: 28499913
mitochondrion: 28499913

msms PMID: 28499913 doi

S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata

Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G072290.2	Barley	cytosol	39.49	79.38
CDY45530	Canola	endoplasmic reticulum	77.95	79.17
ATMG00640.1	Thale cress	extracellular	76.92	78.12
BAV58145	Barley	cytosol	75.38	76.56
TraesCS7A01G526300.1	Wheat	mitochondrion	75.38	76.56
HORVU3Hr1G050700.1	Barley	cytosol	75.38	76.56
TraesCS4D01G236200.1	Wheat	golgi, plastid, unclear	74.87	76.04
TraesCS4B01G147700.1	Wheat	mitochondrion	74.87	76.04
TraesCS7A01G099300.1	Wheat	golgi, unclear	74.36	75.52
TraesCS7A01G011000.1	Wheat	cytosol	73.33	75.26
HORVU6Hr1G044670.1	Barley	cytosol	27.18	74.65
TraesCS6B01G232700.1	Wheat	cytosol	73.33	74.48
TraesCS3A01G491800.1	Wheat	cytosol	73.33	74.48
HORVU3Hr1G113900.1	Barley	extracellular	34.36	74.44
TraesCS7B01G194300.1	Wheat	cytosol	72.82	73.96
PGSC0003DMT400079466	Potato	cytosol	58.97	73.25
HORVU3Hr1G045000.1	Barley	extracellular	23.59	73.02
BAC19854	Rice	plasma membrane	71.79	71.07
TraesCS6B01G233300.1	Wheat	cytosol	71.79	70.71
KRH39429	Soybean	extracellular	35.38	69.7
HORVU6Hr1G001790.1	Barley	cytosol, peroxisome	18.46	69.23
GRMZM5G884912_P01	Maize	plasma membrane, plastid	71.28	63.47
CDY17569	Canola	extracellular	67.69	62.86
PGSC0003DMT400068212	Potato	peroxisome, plasma membrane, plastid	71.28	56.73
Solyc06g042990.1.1	Tomato	mitochondrion, plastid	19.49	55.88
HORVU2Hr1G096060.1	Barley	cytosol, extracellular	25.64	53.19
GSMUA_AchrUn_...	Banana	mitochondrion	18.97	45.68

Protein Annotations

MapMan:2.4.6.1.2	EMBL:ACUP02010540	InterPro:ATP_synth_Bsub_B/MI25	EnsemblPlantsGene:GLYMA_17G185600	GO:GO:0000276	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015078	GO:GO:0015986	GO:GO:0016020	GO:GO:0016021	UniProt:K7MMF4	EnsemblPlants:KRH04770
ProteinID:KRH04770	ProteinID:KRH04770.1	PFAM:PF05405	PANTHER:PTHR37774	UniParc:UPI000233F209	SEG:seg

Description

hypothetical protein

Coordinates

chr17:-:23571268..23573950

Molecular Weight (calculated)

22054.5 Da

IEP (calculated)

10.677

GRAVY (calculated)

-0.107

Length

195 amino acids

Sequence
(BLAST)

001: MRLSSSNMQA RKMLFAAIPS ICTLSSKKIS IYNEEMIVPR CFIGFIIFSR KSLGKTFKVT LDGRIQAIQE ESQQFPNPNE VVPPESNEQQ RLLRISLRIC
101: GTVVESLPMA RCAPKCEKTV QALLCRNLNV KSATLPNANS SCRIRLQDDL GTKFHLLVRR RFCPQCISKA EKIELIRESL VVLRMVRVGG SLKNK

Best Arabidopsis Sequence Match ( ATMG00640.1 )
(BLAST)

001: MRLSITNMDG RKMLFAAILS ICALSSKKIS IYNEEMIVAL CFIGFIIFSR KSLGTTFKVT LDGSLQAIQE ESQQFPNPNE VVPPESNEQQ RLLRISLRIC
101: GTVVESLPMA RCAPKCEKTV QALLCRNLNV KSATLTNATS SRRIRFQDDL VTKFYTLVGK QFAYSCISKA ERVEFIRESL VVLRMVRGGV FS

Arabidopsis Description

ORF25hydrogen ion transporting ATP synthases, rotational mechanism;zinc ion binding [Source:TAIR;Acc:ATMG00640]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.