CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

mitochondrion: 23027867
plasma membrane: 27800704
plastid: 27992503
plasma membrane: 28056797

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G072290.2	Barley	cytosol	46.19	93.81
HORVU3Hr1G045000.1	Barley	extracellular	28.93	90.48
BAV58145	Barley	cytosol	86.8	89.06
HORVU3Hr1G050700.1	Barley	cytosol	86.8	89.06
HORVU3Hr1G113900.1	Barley	extracellular	40.61	88.89
TraesCS4D01G236200.1	Wheat	golgi, plastid, unclear	86.29	88.54
HORVU6Hr1G001790.1	Barley	cytosol, peroxisome	23.35	88.46
TraesCS7A01G011000.1	Wheat	cytosol	85.28	88.42
TraesCS7A01G099300.1	Wheat	golgi, unclear	85.79	88.02
TraesCS7A01G526300.1	Wheat	mitochondrion	85.28	87.5
TraesCS4B01G147700.1	Wheat	mitochondrion	85.28	87.5
TraesCS6B01G232700.1	Wheat	cytosol	84.77	86.98
TraesCS3A01G491800.1	Wheat	cytosol	83.25	85.42
HORVU6Hr1G044670.1	Barley	cytosol	30.46	84.51
TraesCS7B01G194300.1	Wheat	cytosol	81.73	83.85
TraesCS6B01G233300.1	Wheat	cytosol	82.74	82.32
GRMZM5G884912_P01	Maize	plasma membrane, plastid	81.73	73.52
KRH04770	Soybean	mitochondrion	71.07	71.79
CDY45530	Canola	endoplasmic reticulum	65.48	67.19
KRH39429	Soybean	extracellular	32.99	65.66
ATMG00640.1	Thale cress	extracellular	63.45	65.1
HORVU2Hr1G096060.1	Barley	cytosol, extracellular	27.41	57.45
PGSC0003DMT400079466	Potato	cytosol	45.69	57.32
CDY17569	Canola	extracellular	58.88	55.24
Solyc06g042990.1.1	Tomato	mitochondrion, plastid	18.27	52.94
GSMUA_AchrUn_...	Banana	mitochondrion	20.3	49.38
PGSC0003DMT400068212	Potato	peroxisome, plasma membrane, plastid	57.36	46.12
Solyc02g021390.1.1	Tomato	extracellular	12.69	40.32
CDX89718	Canola	nucleus	32.99	24.07

Protein Annotations

MapMan:2.4.6.1.2	EntrezGene:6450126	ProteinID:AAZ99315.1	ProteinID:AAZ99368.1	InterPro:ATP_synth_Bsub_B/MI25	EnsemblPlants:BAC19854
EnsemblPlantsGene:BAC19854	ProteinID:BAC19854	ProteinID:BAC19854.2	GO:GO:0000276	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139
GO:GO:0006754	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015078	GO:GO:0015986	GO:GO:0016020	GO:GO:0016021	GO:GO:0031966
GO:GO:0045263	PFAM:PF05405	PANTHER:PTHR37774	UniProt:Q2F937	UniProt:Q8HCR5	Reactome:R-HSA-163210
Reactome:R-HSA-8949613	UniParc:UPI000009ACAC	UniParc:UPI00004E569B	RefSeq:YP_002000550.1	:	:

Description

orf25hypothetical protein

Coordinates

chrMt:-:18402..18995

Molecular Weight (calculated)

22161.0 Da

IEP (calculated)

9.769

GRAVY (calculated)

-0.060

Length

197 amino acids

Sequence
(BLAST)

001: MGLSSTDKKD RRNMLFAAIP SICASSPKKI SIYNEEMIVA RCFIGFLIFS RKSLGKTFKE TLDGRIESIQ EELQQFFNPN EVIPGESNEQ QRLLRISLRI
101: CSAVVESLPT ARCAPKCEKT VQALLCRNLN VKSATLLNAT SSRRIRLQDD IVTGFHFSVS ERFVSGSTFK ASTVEQIREA FVPIDLIREG LIVLRKV

Best Arabidopsis Sequence Match ( ATMG00640.1 )
(BLAST)

001: MRLSITNMDG RKMLFAAILS ICALSSKKIS IYNEEMIVAL CFIGFIIFSR KSLGTTFKVT LDGSLQAIQE ESQQFPNPNE VVPPESNEQQ RLLRISLRIC
101: GTVVESLPMA RCAPKCEKTV QALLCRNLNV KSATLTNATS SRRIRFQDDL VTKFYTLVGK QFAYSCISKA ERVEFIRESL VVLRMVRGGV FS

Arabidopsis Description

ORF25hydrogen ion transporting ATP synthases, rotational mechanism;zinc ion binding [Source:TAIR;Acc:ATMG00640]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.