CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45530	Canola	endoplasmic reticulum	74.29	81.25
ATMG00640.1	Thale cress	extracellular	71.43	78.12
HORVU6Hr1G044670.1	Barley	cytosol	25.71	76.06
KRH04770	Soybean	mitochondrion	62.86	67.69
PGSC0003DMT400079466	Potato	cytosol	50.0	66.88
TraesCS7A01G011000.1	Wheat	cytosol	54.76	60.53
BAV58145	Barley	cytosol	55.24	60.42
TraesCS7A01G526300.1	Wheat	mitochondrion	55.24	60.42
HORVU3Hr1G050700.1	Barley	cytosol	55.24	60.42
Solyc06g042990.1.1	Tomato	mitochondrion, plastid	19.52	60.29
TraesCS4D01G236200.1	Wheat	golgi, plastid, unclear	54.76	59.9
TraesCS4B01G147700.1	Wheat	mitochondrion	54.76	59.9
TraesCS7A01G099300.1	Wheat	golgi, unclear	54.29	59.38
BAC19854	Rice	plasma membrane	55.24	58.88
TraesCS6B01G232700.1	Wheat	cytosol	53.81	58.85
TraesCS7B01G194300.1	Wheat	cytosol	53.33	58.33
TraesCS3A01G491800.1	Wheat	cytosol	52.86	57.81
TraesCS6B01G233300.1	Wheat	cytosol	52.38	55.56
HORVU5Hr1G072290.2	Barley	cytosol	24.76	53.61
GRMZM5G884912_P01	Maize	plasma membrane, plastid	52.86	50.68
HORVU3Hr1G113900.1	Barley	extracellular	20.95	48.89
PGSC0003DMT400068212	Potato	peroxisome, plasma membrane, plastid	56.19	48.16
HORVU2Hr1G096060.1	Barley	cytosol, extracellular	20.95	46.81
GSMUA_AchrUn_...	Banana	mitochondrion	17.62	45.68
HORVU3Hr1G045000.1	Barley	extracellular	10.95	36.51
HORVU6Hr1G001790.1	Barley	cytosol, peroxisome	8.1	32.69
CDX89718	Canola	nucleus	36.19	28.15

Protein Annotations

MapMan:2.4.6.1.2	GO:A0A078FWU3	UniProt:A0A078FWU3	InterPro:ATP_synth_Bsub_B/MI25	EnsemblPlants:CDY17569	ProteinID:CDY17569
ProteinID:CDY17569.1	GO:GO:0000276	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015078	GO:GO:0015986	GO:GO:0016020
EnsemblPlantsGene:GSBRNA2T00001753001	PFAM:PF05405	PANTHER:PTHR37774	TMHMM:TMhelix	UniParc:UPI0004EF4846	SEG:seg

Description

BnaC01g26930DBnaC01g26930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FWU3]

Coordinates

chrLK032075:-:638184..639335

Molecular Weight (calculated)

23719.9 Da

IEP (calculated)

9.297

GRAVY (calculated)

-0.160

Length

210 amino acids

Sequence
(BLAST)

001: MRLSSTNMDA RKMLFAAILS ICALSTTFKA TLDGRIQAIQ EESQQFPNPN EVVPPESNEQ QRLLRISLRI CGTVVESLPM ARCAPKCEKT VQALLCRNLN
101: VKSATLTNAT SSRRIRFQDD LVTKFYTLVG NQFAYSSISK AERVEFIRES LVVLRMPPRQ FFPILIAAGK RLLRPHEIFL EVGSTAGYYQ VHIEEGDEPK
201: MTCVTSKQPY

Best Arabidopsis Sequence Match ( ATMG00640.1 )
(BLAST)

001: MRLSITNMDG RKMLFAAILS ICALSSKKIS IYNEEMIVAL CFIGFIIFSR KSLGTTFKVT LDGSLQAIQE ESQQFPNPNE VVPPESNEQQ RLLRISLRIC
101: GTVVESLPMA RCAPKCEKTV QALLCRNLNV KSATLTNATS SRRIRFQDDL VTKFYTLVGK QFAYSCISKA ERVEFIRESL VVLRMVRGGV FS

Arabidopsis Description

ORF25hydrogen ion transporting ATP synthases, rotational mechanism;zinc ion binding [Source:TAIR;Acc:ATMG00640]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.