CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G044670.1	Barley	cytosol	14.07	53.52
CDY45530	Canola	endoplasmic reticulum	27.41	38.54
CDY17569	Canola	extracellular	28.15	36.19
BAV58145	Barley	cytosol	25.19	35.42
TraesCS7A01G526300.1	Wheat	mitochondrion	25.19	35.42
TraesCS4D01G236200.1	Wheat	golgi, plastid, unclear	25.19	35.42
HORVU3Hr1G050700.1	Barley	cytosol	25.19	35.42
TraesCS4B01G147700.1	Wheat	mitochondrion	25.19	35.42
TraesCS7B01G194300.1	Wheat	cytosol	24.81	34.9
TraesCS7A01G099300.1	Wheat	golgi, unclear	24.81	34.9
TraesCS6B01G232700.1	Wheat	cytosol	24.81	34.9
TraesCS7A01G011000.1	Wheat	cytosol	24.44	34.74
TraesCS3A01G491800.1	Wheat	cytosol	24.44	34.38
TraesCS6B01G233300.1	Wheat	cytosol	25.19	34.34
BAC19854	Rice	plasma membrane	24.07	32.99
HORVU3Hr1G113900.1	Barley	extracellular	10.74	32.22
GRMZM5G884912_P01	Maize	plasma membrane, plastid	25.93	31.96
HORVU5Hr1G072290.2	Barley	cytosol	11.11	30.93
GSMUA_AchrUn_...	Banana	mitochondrion	7.04	23.46
HORVU2Hr1G096060.1	Barley	cytosol, extracellular	7.78	22.34
KRH39429	Soybean	extracellular	7.78	21.21
HORVU3Hr1G045000.1	Barley	extracellular	2.59	11.11
HORVU6Hr1G001790.1	Barley	cytosol, peroxisome	0.74	3.85

Protein Annotations

MapMan:2.4.6.1.2	GO:A0A078DRB8	InterPro:ATP_synth_Bsub_B/MI25	EnsemblPlants:CDX89718	ProteinID:CDX89718	ProteinID:CDX89718.1
GO:GO:0000276	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0015078	GO:GO:0015986	GO:GO:0016020	EnsemblPlantsGene:GSBRNA2T00150127001
PFAM:PF05405	PANTHER:PTHR37774	UniParc:UPI0004EE691C	SEG:seg	:	:

Description

BnaC03g46320D

Coordinates

chrLK031860:+:1065678..1068410

Molecular Weight (calculated)

29773.4 Da

IEP (calculated)

9.860

GRAVY (calculated)

-0.671

Length

270 amino acids

Sequence
(BLAST)

001: MVPSTHKKDT PVTTSGIDAH HTSGARLSSR IQAIQEESQQ FPNPNEVVPP ESNEQQRLLR ISLRICGTVV ESLPMARCAP KCEKTVQAFA LRPCKGLQVE
101: LEERLPLSQS KMSTVKILAF LYVQPGRKGK TERQSPEGYV RYTGPSQSAH KEERKGAATA QQIIVGFGDT TIRKKAALPR NNRSIEKAAR NTDTTKEREA
201: DKGRIPTTID KRQFHYGGIP TSCSGTSSSN RSIPLEPLAP ELRNLVSREM LAQEGELSSE ASAHISIQDF

Best Arabidopsis Sequence Match ( ATMG00640.1 )
(BLAST)

001: MRLSITNMDG RKMLFAAILS ICALSSKKIS IYNEEMIVAL CFIGFIIFSR KSLGTTFKVT LDGSLQAIQE ESQQFPNPNE VVPPESNEQQ RLLRISLRIC
101: GTVVESLPMA RCAPKCEKTV QALLCRNLNV KSATLTNATS SRRIRFQDDL VTKFYTLVGK QFAYSCISKA ERVEFIRESL VVLRMVRGGV FS

Arabidopsis Description

ORF25hydrogen ion transporting ATP synthases, rotational mechanism;zinc ion binding [Source:TAIR;Acc:ATMG00640]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.