Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G236200.1 | Wheat | golgi, plastid, unclear | 97.4 | 97.4 |
| BAV58145 | Barley | cytosol | 95.31 | 95.31 |
| TraesCS4B01G147700.1 | Wheat | mitochondrion | 95.31 | 95.31 |
| HORVU3Hr1G050700.1 | Barley | cytosol | 95.31 | 95.31 |
| TraesCS7B01G194300.1 | Wheat | cytosol | 92.71 | 92.71 |
| TraesCS6B01G233300.1 | Wheat | cytosol | 90.1 | 87.37 |
| BAC19854 | Rice | plasma membrane | 86.98 | 84.77 |
| GRMZM5G884912_P01 | Maize | plasma membrane, plastid | 87.5 | 76.71 |
| KRH04770 | Soybean | mitochondrion | 74.48 | 73.33 |
| CDY45530 | Canola | endoplasmic reticulum | 67.71 | 67.71 |
| ATMG00640.1 | Thale cress | extracellular | 65.62 | 65.62 |
| KRH39429 | Soybean | extracellular | 32.81 | 63.64 |
| PGSC0003DMT400079466 | Potato | cytosol | 47.4 | 57.96 |
| CDY17569 | Canola | extracellular | 58.85 | 53.81 |
| Solyc06g042990.1.1 | Tomato | mitochondrion, plastid | 17.19 | 48.53 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 20.31 | 48.15 |
| PGSC0003DMT400068212 | Potato | peroxisome, plasma membrane, plastid | 59.38 | 46.53 |
| Solyc02g021390.1.1 | Tomato | extracellular | 11.98 | 37.1 |
| CDX89718 | Canola | nucleus | 34.9 | 24.81 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G232700.1 | EnsemblPlantsGene:TraesCS6B01G232700 | GO:GO:0000276 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006139 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015078 | GO:GO:0015986 |
| GO:GO:0016020 | InterPro:ATP_synth_Bsub_B/MI25 | PANTHER:PTHR37774 | PFAM:PF05405 | MapMan:2.4.6.1.2 | : |
Description
No Description!
Coordinates
chr6B:-:388165413..388165991
Molecular Weight (calculated)
21771.7 Da
IEP (calculated)
10.052
GRAVY (calculated)
0.001
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MRFLSTDMKD RNMLFAAIPS ICASSPKKIS IYNEQMIVAR CFIGFLIFSR KSLGKTFKET LDGRIESIQE ELLQFFNPNE VIPEESNEQQ RLLRISLRIC
101: STVVESLPTA RCAPKCEKTV QALLCRNLNV KPATLLNVTS SRRIRLQDDI VTGFHFSVSE RFVSGSTFKA STIHLIREDL IVLRKVRVGG SI
101: STVVESLPTA RCAPKCEKTV QALLCRNLNV KPATLLNVTS SRRIRLQDDI VTGFHFSVSE RFVSGSTFKA STIHLIREDL IVLRKVRVGG SI
001: MRLSITNMDG RKMLFAAILS ICALSSKKIS IYNEEMIVAL CFIGFIIFSR KSLGTTFKVT LDGSLQAIQE ESQQFPNPNE VVPPESNEQQ RLLRISLRIC
101: GTVVESLPMA RCAPKCEKTV QALLCRNLNV KSATLTNATS SRRIRFQDDL VTKFYTLVGK QFAYSCISKA ERVEFIRESL VVLRMVRGGV FS
101: GTVVESLPMA RCAPKCEKTV QALLCRNLNV KSATLTNATS SRRIRFQDDL VTKFYTLVGK QFAYSCISKA ERVEFIRESL VVLRMVRGGV FS
Arabidopsis Description
ORF25hydrogen ion transporting ATP synthases, rotational mechanism;zinc ion binding [Source:TAIR;Acc:ATMG00640]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.