Factsheet for PGSC0003DMT400079466

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G044670.1	Barley	cytosol	31.85	70.42
Solyc06g042990.1.1	Tomato	mitochondrion, plastid	29.94	69.12
KRH04770	Soybean	mitochondrion	73.25	58.97
ATMG00640.1	Thale cress	extracellular	69.43	56.77
CDY45530	Canola	endoplasmic reticulum	68.79	56.25
PGSC0003DMT400068212	Potato	peroxisome, plasma membrane, plastid	83.44	53.47
CDY17569	Canola	extracellular	66.88	50.0
HORVU2Hr1G096060.1	Barley	cytosol, extracellular	29.94	50.0
HORVU3Hr1G050700.1	Barley	cytosol	59.24	48.44
TraesCS4D01G236200.1	Wheat	golgi, plastid, unclear	59.24	48.44
TraesCS7A01G526300.1	Wheat	mitochondrion	59.24	48.44
BAV58145	Barley	cytosol	59.24	48.44
TraesCS7A01G011000.1	Wheat	cytosol	58.6	48.42
TraesCS4B01G147700.1	Wheat	mitochondrion	58.6	47.92
TraesCS7A01G099300.1	Wheat	golgi, unclear	58.6	47.92
TraesCS3A01G491800.1	Wheat	cytosol	58.6	47.92
TraesCS6B01G232700.1	Wheat	cytosol	57.96	47.4
TraesCS7B01G194300.1	Wheat	cytosol	57.32	46.88
BAC19854	Rice	plasma membrane	57.32	45.69
TraesCS6B01G233300.1	Wheat	cytosol	57.32	45.45
GSMUA_AchrUn_...	Banana	mitochondrion	22.93	44.44
GRMZM5G884912_P01	Maize	plasma membrane, plastid	57.32	41.1
HORVU5Hr1G072290.2	Barley	cytosol	20.38	32.99
HORVU3Hr1G113900.1	Barley	extracellular	18.47	32.22
HORVU3Hr1G045000.1	Barley	extracellular	7.64	19.05
HORVU6Hr1G001790.1	Barley	cytosol, peroxisome	1.91	5.77

Protein Annotations

MapMan:2.4.6.1.2	InterPro:ATP_synth_Bsub_B/MI25	GO:GO:0000276	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006810
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015078	GO:GO:0015986
GO:GO:0016020	UniProt:M1D1W1	PFAM:PF05405	EnsemblPlantsGene:PGSC0003DMG400030942	PGSC:PGSC0003DMG400030942	EnsemblPlants:PGSC0003DMT400079466
PANTHER:PTHR37774	UniParc:UPI00029633B8	:	:	:	:

Description

ATP synthase protein MI25 [Source:PGSC_GENE;Acc:PGSC0003DMG400030942]

Coordinates

chr4:-:35033933..35034406

Molecular Weight (calculated)

18149.2 Da

IEP (calculated)

9.341

GRAVY (calculated)

-0.283

Length

157 amino acids

Sequence
(BLAST)

001: MFYRIYHIQS EEFRYFKVTL DGRIQAIQEE SQQFPNPNEV VPLESNEQQQ LPRISLRICG TVVESVPMAR CAPKCKKTVQ ALLCRNLNVK SATLPNATSS
101: HHIRLQDDIA IKMHILVGKS FFPRCSSKVE RVEFIRESVL VLRMVRVGDS LKNKEFE

Best Arabidopsis Sequence Match ( ATMG00640.1 )
(BLAST)

001: MRLSITNMDG RKMLFAAILS ICALSSKKIS IYNEEMIVAL CFIGFIIFSR KSLGTTFKVT LDGSLQAIQE ESQQFPNPNE VVPPESNEQQ RLLRISLRIC
101: GTVVESLPMA RCAPKCEKTV QALLCRNLNV KSATLTNATS SRRIRFQDDL VTKFYTLVGK QFAYSCISKA ERVEFIRESL VVLRMVRGGV FS

Arabidopsis Description

ORF25hydrogen ion transporting ATP synthases, rotational mechanism;zinc ion binding [Source:TAIR;Acc:ATMG00640]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.