Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G147700.1 | Wheat | mitochondrion | 87.88 | 90.62 |
| TraesCS6B01G232700.1 | Wheat | cytosol | 87.37 | 90.1 |
| TraesCS7B01G194300.1 | Wheat | cytosol | 86.87 | 89.58 |
| BAC19854 | Rice | plasma membrane | 82.32 | 82.74 |
| HORVU6Hr1G001790.1 | Barley | cytosol, peroxisome | 21.72 | 82.69 |
| GRMZM5G884912_P01 | Maize | plasma membrane, plastid | 83.33 | 75.34 |
| KRH04770 | Soybean | mitochondrion | 70.71 | 71.79 |
| CDY45530 | Canola | endoplasmic reticulum | 64.14 | 66.15 |
| ATMG00640.1 | Thale cress | extracellular | 62.12 | 64.06 |
| KRH39429 | Soybean | extracellular | 31.31 | 62.63 |
| PGSC0003DMT400079466 | Potato | cytosol | 45.45 | 57.32 |
| CDY17569 | Canola | extracellular | 55.56 | 52.38 |
| Solyc06g042990.1.1 | Tomato | mitochondrion, plastid | 17.17 | 50.0 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 19.19 | 46.91 |
| PGSC0003DMT400068212 | Potato | peroxisome, plasma membrane, plastid | 57.07 | 46.12 |
| Solyc02g021390.1.1 | Tomato | extracellular | 11.11 | 35.48 |
| CDX89718 | Canola | nucleus | 34.34 | 25.19 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G233300.1 | EnsemblPlantsGene:TraesCS6B01G233300 | GO:GO:0000276 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006139 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015078 | GO:GO:0015986 |
| GO:GO:0016020 | InterPro:ATP_synth_Bsub_B/MI25 | PANTHER:PTHR37774 | PFAM:PF05405 | MapMan:2.4.6.1.2 | : |
Description
No Description!
Coordinates
chr6B:-:388357426..388358022
Molecular Weight (calculated)
22442.7 Da
IEP (calculated)
9.253
GRAVY (calculated)
0.101
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDRNMLFAA IPSICASSPK KISIYNEEMI VARCFIGFLI FSRKSLGKTF KETLDGRIES IQEELLQFFN PNEVIPEESN EQQRLLRISL RICSTVVESL
101: PMTRCAPKCE KIVQALLCRN LNVKSATLLN ATSSRRICLQ DDIVTGFHFS VSERFVSGST FKASTIDLIR EGLIVLRNVR VGGFYLGRIR RISFMCSC
101: PMTRCAPKCE KIVQALLCRN LNVKSATLLN ATSSRRICLQ DDIVTGFHFS VSERFVSGST FKASTIDLIR EGLIVLRNVR VGGFYLGRIR RISFMCSC
001: MRLSITNMDG RKMLFAAILS ICALSSKKIS IYNEEMIVAL CFIGFIIFSR KSLGTTFKVT LDGSLQAIQE ESQQFPNPNE VVPPESNEQQ RLLRISLRIC
101: GTVVESLPMA RCAPKCEKTV QALLCRNLNV KSATLTNATS SRRIRFQDDL VTKFYTLVGK QFAYSCISKA ERVEFIRESL VVLRMVRGGV FS
101: GTVVESLPMA RCAPKCEKTV QALLCRNLNV KSATLTNATS SRRIRFQDDL VTKFYTLVGK QFAYSCISKA ERVEFIRESL VVLRMVRGGV FS
Arabidopsis Description
ORF25hydrogen ion transporting ATP synthases, rotational mechanism;zinc ion binding [Source:TAIR;Acc:ATMG00640]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.