CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

mitochondrion 2
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	mitochondrion
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
ATMG00640.1	Thale cress	extracellular	94.79	94.79
KRH04770	Soybean	mitochondrion	79.17	77.95
HORVU6Hr1G044670.1	Barley	cytosol	28.12	76.06
CDY17569	Canola	extracellular	81.25	74.29
BAV58145	Barley	cytosol	69.27	69.27
TraesCS7A01G526300.1	Wheat	mitochondrion	69.27	69.27
HORVU3Hr1G050700.1	Barley	cytosol	69.27	69.27
PGSC0003DMT400079466	Potato	cytosol	56.25	68.79
TraesCS4D01G236200.1	Wheat	golgi, plastid, unclear	68.75	68.75
TraesCS4B01G147700.1	Wheat	mitochondrion	68.75	68.75
TraesCS7A01G099300.1	Wheat	golgi, unclear	68.23	68.23
HORVU5Hr1G072290.2	Barley	cytosol	34.38	68.04
TraesCS7A01G011000.1	Wheat	cytosol	67.19	67.89
TraesCS6B01G232700.1	Wheat	cytosol	67.71	67.71
TraesCS7B01G194300.1	Wheat	cytosol	67.19	67.19
TraesCS3A01G491800.1	Wheat	cytosol	66.15	66.15
BAC19854	Rice	plasma membrane	67.19	65.48
TraesCS6B01G233300.1	Wheat	cytosol	66.15	64.14
HORVU3Hr1G113900.1	Barley	extracellular	29.17	62.22
Solyc06g042990.1.1	Tomato	mitochondrion, plastid	21.35	60.29
GRMZM5G884912_P01	Maize	plasma membrane, plastid	65.1	57.08
HORVU3Hr1G045000.1	Barley	extracellular	18.23	55.56
PGSC0003DMT400068212	Potato	peroxisome, plasma membrane, plastid	70.31	55.1
HORVU6Hr1G001790.1	Barley	cytosol, peroxisome	14.06	51.92
HORVU2Hr1G096060.1	Barley	cytosol, extracellular	23.96	48.94
GSMUA_AchrUn_...	Banana	mitochondrion	19.27	45.68
CDX89718	Canola	nucleus	38.54	27.41

Protein Annotations

MapMan:2.4.6.1.2	ProteinID:AIZ06167.1	ProteinID:AIZ06242.1	ProteinID:AKD00177.1	InterPro:ATP_synth_Bsub_B/MI25	ProteinID:CBX48338.1
EnsemblPlants:CDY45530	ProteinID:CDY45530	ProteinID:CDY45530.1	GO:F8K8Q7	UniProt:F8K8Q7	GO:GO:0000276
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015078	GO:GO:0015986	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00082224001
PFAM:PF05405	PANTHER:PTHR37774	UniParc:UPI000217AA3C	SEG:seg	:	:

Description

BnaCnng12890DBnaCnng12890D protein [Source:UniProtKB/TrEMBL;Acc:F8K8Q7]

Coordinates

chrLK032627:+:165794..166372

Molecular Weight (calculated)

21528.4 Da

IEP (calculated)

10.091

GRAVY (calculated)

0.033

Length

192 amino acids

Sequence
(BLAST)

001: MRLSSTNMDA RKMLFAAILS ICALSSKKIS IYNEEMIVAL CFIGFIIFSR KSLGTTFKAT LDGRIQAIQE ESQQFPNPNE VVPPESNEQQ RLLRISLRIC
101: GTVVESLPMA RCAPKCEKTV QALLCRNLNV KSATLTNATS SRRIRFQDDL VTKFYTLVGN QFAYSSISKA ERVEFIRESL VVLRMVRGGG FS

Best Arabidopsis Sequence Match ( ATMG00640.1 )
(BLAST)

001: MRLSITNMDG RKMLFAAILS ICALSSKKIS IYNEEMIVAL CFIGFIIFSR KSLGTTFKVT LDGSLQAIQE ESQQFPNPNE VVPPESNEQQ RLLRISLRIC
101: GTVVESLPMA RCAPKCEKTV QALLCRNLNV KSATLTNATS SRRIRFQDDL VTKFYTLVGK QFAYSCISKA ERVEFIRESL VVLRMVRGGV FS

Arabidopsis Description

ORF25hydrogen ion transporting ATP synthases, rotational mechanism;zinc ion binding [Source:TAIR;Acc:ATMG00640]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.