Factsheet for HORVU2Hr1G015410.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G093390.2
HORVU3Hr1G027650.2
HORVU3Hr1G054240.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G10985.1	HORVU1Hr1G093390.2	AT2G42580.1	19000166
AT3G10985.1	HORVU3Hr1G027650.2	AT2G42580.1	19000166
AT3G10985.1	HORVU3Hr1G054240.2	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G091300.1	Wheat	mitochondrion	37.82	75.26
TraesCS2B01G107100.1	Wheat	mitochondrion	38.34	73.27
HORVU2Hr1G015360.4	Barley	cytosol	67.88	72.38
TraesCS2A01G092200.1	Wheat	mitochondrion	35.23	67.33
Os07t0691300-01	Rice	mitochondrion	26.42	51.52
KXG37021	Sorghum	cytosol	53.89	49.06
GSMUA_Achr10P...	Banana	cytosol	25.91	45.87
KRG97665	Soybean	cytosol	36.79	44.94
AT3G10985.1	Thale cress	plastid	24.87	43.64
Zm00001d022569_P001	Maize	cytosol	53.89	42.8
Bra034157.1-P	Field mustard	extracellular	22.8	42.31
HORVU4Hr1G054970.1	Barley	cytosol	30.05	42.03
KRH31209	Soybean	cytosol	37.31	41.86
CDY00710	Canola	extracellular	22.28	41.35
CDX73898	Canola	extracellular	22.28	41.35
CDY00985	Canola	cytosol	35.75	40.35
KRH30153	Soybean	cytosol	30.57	40.14
KRH17129	Soybean	cytosol	32.12	38.75
GSMUA_Achr6P15760_001	Banana	cytosol	23.83	38.66
Solyc06g048820.1.1	Tomato	cytosol	21.24	37.96
PGSC0003DMT400046104	Potato	cytosol	21.76	37.5
Solyc06g050760.1.1	Tomato	cytosol	22.28	37.39
KRG98193	Soybean	cytosol	31.09	36.81
Bra029887.1-P	Field mustard	cytosol	35.23	36.17
CDY08559	Canola	cytosol, plasma membrane	35.23	33.01
PGSC0003DMT400017004	Potato	extracellular, plasma membrane, plastid	35.75	32.39
VIT_06s0004g07550.t01	Wine grape	extracellular, vacuole	36.79	31.84

Protein Annotations

EnsemblPlants:HORVU2Hr1G015410.2	EnsemblPlantsGene:HORVU2Hr1G015410	Gene3D:3.10.450.50	InterPro:NTF2-like_dom_sf	InterPro:Wun1-like	PANTHER:PTHR33703
PANTHER:PTHR33703:SF4	PFAM:PF07107	SEG:seg	SUPFAM:SSF54427	UniParc:UPI000B472627	UniProt:A0A287H5L0
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:34116106..34116686

Molecular Weight (calculated)

19759.3 Da

IEP (calculated)

8.517

GRAVY (calculated)

-0.271

Length

193 amino acids

Sequence
(BLAST)

001: XXXSAPRGHE TEEQRNKFLV LRLYEALNAR DHAAVHSLLA PDLEWWFHGP PAHQHMMRLL TGGTSPASSS FXXXXXXXXA FGSTVIAEGV DDKATKAYWV
101: HAWTVGGDGV ITQLREYFNT DLTVTRLAAA AASKCVWQSR RXXXPAHQHM MRLLTGGTSP SSFRFQPRSV DAFGSTVIAE GVDDKAKAYW VHA

Best Arabidopsis Sequence Match ( AT5G01740.1 )
(BLAST)

001: MEAHNVEIST RLTPEMKNQG TIELLYKALQ QGDTSTVTKV VASDVEWWFH GPHDCQHMMR LLTGEPPRQV SFRFEPSSVQ VVVPGHDCVI AEGWEGSRVY
101: WVHVWKLKDG VVTELREYFN TWLTVTDYSL GAVGWDMGRC TVWESVPRDL ARGSLPSLLL AI

Arabidopsis Description

AT5g01740/T20L15_10 [Source:UniProtKB/TrEMBL;Acc:Q9LZX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.