Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400046104 | Potato | cytosol | 86.96 | 89.29 |
| Solyc06g048820.1.1 | Tomato | cytosol | 65.22 | 69.44 |
| CDX73898 | Canola | extracellular | 55.65 | 61.54 |
| Bra034157.1-P | Field mustard | extracellular | 54.78 | 60.58 |
| CDY00710 | Canola | extracellular | 54.78 | 60.58 |
| TraesCS2D01G091300.1 | Wheat | mitochondrion | 48.7 | 57.73 |
| AT3G10985.1 | Thale cress | plastid | 53.91 | 56.36 |
| TraesCS2B01G107100.1 | Wheat | mitochondrion | 47.83 | 54.46 |
| TraesCS2A01G092200.1 | Wheat | mitochondrion | 47.83 | 54.46 |
| GSMUA_Achr10P... | Banana | cytosol | 48.7 | 51.38 |
| GSMUA_Achr6P15760_001 | Banana | cytosol | 52.17 | 50.42 |
| Os07t0691300-01 | Rice | mitochondrion | 38.26 | 44.44 |
| Zm00001d038029_P001 | Maize | mitochondrion | 41.74 | 42.86 |
| TraesCS4A01G115600.1 | Wheat | mitochondrion | 48.7 | 41.48 |
| HORVU4Hr1G054970.1 | Barley | cytosol | 49.57 | 41.3 |
| KRG97665 | Soybean | cytosol | 56.52 | 41.14 |
| KRH31209 | Soybean | cytosol | 56.52 | 37.79 |
| CDY00985 | Canola | cytosol | 53.04 | 35.67 |
| Bra029887.1-P | Field mustard | cytosol | 52.17 | 31.91 |
| TraesCS4B01G188400.1 | Wheat | cytosol | 50.43 | 31.69 |
| HORVU2Hr1G015360.4 | Barley | cytosol | 47.83 | 30.39 |
| CDY08559 | Canola | cytosol, plasma membrane | 52.17 | 29.13 |
| Solyc09g014940.1.1 | Tomato | cytosol | 40.87 | 28.66 |
| Zm00001d047696_P001 | Maize | cytosol | 46.09 | 26.11 |
| Os03t0299600-01 | Rice | mitochondrion | 47.83 | 24.12 |
| Os05t0342000-00 | Rice | cytosol, plastid | 42.61 | 24.02 |
| KXG37021 | Sorghum | cytosol | 43.48 | 23.58 |
| HORVU2Hr1G015410.2 | Barley | cytosol | 37.39 | 22.28 |
| OQU92745 | Sorghum | plastid | 48.7 | 21.46 |
| TraesCS4D01G189800.1 | Wheat | plastid | 49.57 | 21.03 |
| Zm00001d028808_P001 | Maize | plastid | 46.09 | 20.23 |
| Zm00001d022569_P001 | Maize | cytosol | 42.61 | 20.16 |
| EES19325 | Sorghum | cytosol | 41.74 | 19.43 |
| OQU92744 | Sorghum | cytosol | 49.57 | 18.94 |
Protein Annotations
| EnsemblPlants:Solyc06g050760.1.1 | EnsemblPlantsGene:Solyc06g050760.1 | InterPro:NTF2-like_dom_sf | InterPro:Wound-induced_1/12_sub | InterPro:Wun1-like | PANTHER:PTHR33703 |
| PANTHER:PTHR33703:SF11 | PFAM:PF07107 | PIRSF:PIRSF007948 | SEG:seg | SUPFAM:SSF54427 | UniParc:UPI0002766CED |
| UniProt:K4C5M0 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr6:-:33537392..33537739
Molecular Weight (calculated)
12640.7 Da
IEP (calculated)
5.470
GRAVY (calculated)
-0.125
Length
115 amino acids
Sequence
(BLAST)
(BLAST)
001: MRILTGTANS DHYFFKFIPQ SVDAFGSTVL VEGCDPDHSI TWVHAWTVDD GIITQVREYF NTSLTVTRLD NSNNNNNCPS SDLSSIAATR HCPSLWESSL
101: PNRVGKSVPG LVLAL
101: PNRVGKSVPG LVLAL
001: MRVLTGGVSP SSSSFEFVPL SVVSFGSTVI AEGCDAATSI SWIHAWTVAN GIITQVREYS NTSLTVTRIG NVVAGRRSAE IAPPSHCSSV WESQFSGRAG
101: KPVPGLVLAI
101: KPVPGLVLAI
Arabidopsis Description
SAG20Senescence associated gene 20 [Source:UniProtKB/Swiss-Prot;Acc:Q94AK6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.