Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G115600.1 | Wheat | mitochondrion | 48.71 | 97.78 |
| HORVU4Hr1G054970.1 | Barley | cytosol | 47.97 | 94.2 |
| TraesCS4B01G188400.1 | Wheat | cytosol | 57.93 | 85.79 |
| TraesCS2D01G091300.1 | Wheat | mitochondrion | 26.94 | 75.26 |
| Zm00001d047696_P001 | Maize | cytosol | 45.02 | 60.1 |
| Os03t0299600-01 | Rice | mitochondrion | 47.6 | 56.58 |
| GSMUA_Achr10P... | Banana | cytosol | 22.51 | 55.96 |
| OQU92745 | Sorghum | plastid | 51.29 | 53.26 |
| CDX73898 | Canola | extracellular | 20.3 | 52.88 |
| Bra034157.1-P | Field mustard | extracellular | 20.3 | 52.88 |
| CDY00710 | Canola | extracellular | 19.93 | 51.92 |
| Zm00001d028808_P001 | Maize | plastid | 49.45 | 51.15 |
| PGSC0003DMT400046104 | Potato | cytosol | 21.03 | 50.89 |
| GSMUA_Achr6P15760_001 | Banana | cytosol | 22.14 | 50.42 |
| KRG97665 | Soybean | cytosol | 29.15 | 50.0 |
| AT3G10985.1 | Thale cress | plastid | 20.3 | 50.0 |
| Solyc06g050760.1.1 | Tomato | cytosol | 21.03 | 49.57 |
| KRH31209 | Soybean | cytosol | 29.89 | 47.09 |
| Solyc06g048820.1.1 | Tomato | cytosol | 18.45 | 46.3 |
| CDY00985 | Canola | cytosol | 29.15 | 46.2 |
| KRH30153 | Soybean | cytosol | 23.99 | 44.22 |
| OQU92744 | Sorghum | cytosol | 48.71 | 43.85 |
| KRH17129 | Soybean | cytosol | 25.09 | 42.5 |
| Bra029887.1-P | Field mustard | cytosol | 28.78 | 41.49 |
| KRG98193 | Soybean | cytosol | 24.35 | 40.49 |
| TraesCS2D01G090900.1 | Wheat | cytosol | 22.51 | 39.87 |
| TraesCS2D01G089100.1 | Wheat | cytosol | 15.5 | 38.53 |
| CDY08559 | Canola | cytosol, plasma membrane | 29.15 | 38.35 |
| PGSC0003DMT400017004 | Potato | extracellular, plasma membrane, plastid | 29.52 | 37.56 |
| VIT_06s0004g07550.t01 | Wine grape | extracellular, vacuole | 30.63 | 37.22 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G189800.1 | EnsemblPlantsGene:TraesCS4D01G189800 | Gene3D:3.10.450.50 | InterPro:NTF2-like_dom_sf | InterPro:Wun1-like | PANTHER:PTHR33703 |
| PANTHER:PTHR33703:SF4 | PFAM:PF07107 | SEG:seg | SUPFAM:SSF54427 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr4D:+:329310821..329311636
Molecular Weight (calculated)
28842.6 Da
IEP (calculated)
9.513
GRAVY (calculated)
-0.386
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIPTAYISC SAPAKPSTPL ASLQQLQAQS IASTRLQYRA RLASQEASST SPSSSGDRSL RGASRQELAN HQQTLAAAPA PDAELAGETE EQRGKFLVLR
101: LYEALNARDA RRAQELLAPD LEWWFHGPPA HQHMMRLLTG AGTNAEFRFS PRSVDAFGST VIAEGSADGA GQLLYWVHAW TVGPDGVITQ LREYFNTDLT
201: VTRLSAAAAT NNASAGSPSH SSSSSASSSP SSSTSSGLSS PAHTPKWPKC LWQSRRSDRA RKSLPGLVLA I
101: LYEALNARDA RRAQELLAPD LEWWFHGPPA HQHMMRLLTG AGTNAEFRFS PRSVDAFGST VIAEGSADGA GQLLYWVHAW TVGPDGVITQ LREYFNTDLT
201: VTRLSAAAAT NNASAGSPSH SSSSSASSSP SSSTSSGLSS PAHTPKWPKC LWQSRRSDRA RKSLPGLVLA I
001: MEAHNVEIST RLTPEMKNQG TIELLYKALQ QGDTSTVTKV VASDVEWWFH GPHDCQHMMR LLTGEPPRQV SFRFEPSSVQ VVVPGHDCVI AEGWEGSRVY
101: WVHVWKLKDG VVTELREYFN TWLTVTDYSL GAVGWDMGRC TVWESVPRDL ARGSLPSLLL AI
101: WVHVWKLKDG VVTELREYFN TWLTVTDYSL GAVGWDMGRC TVWESVPRDL ARGSLPSLLL AI
Arabidopsis Description
AT5g01740/T20L15_10 [Source:UniProtKB/TrEMBL;Acc:Q9LZX2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.