Factsheet for Os05t0342000-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0218200-00
Os05t0210600-01
Os05t0587300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G10985.1	Os01t0218200-00	AT2G42580.1	19000166
AT3G10985.1	Os05t0210600-01	AT2G42580.1	19000166
AT3G10985.1	Os05t0587300-01	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038029_P001	Maize	mitochondrion	41.18	75.0
EES19325	Sorghum	cytosol	66.18	54.66
Os07t0691300-01	Rice	mitochondrion	23.04	47.47
Bra034157.1-P	Field mustard	extracellular	24.02	47.12
CDX73898	Canola	extracellular	23.04	45.19
CDY00710	Canola	extracellular	23.04	45.19
AT3G10985.1	Thale cress	plastid	23.53	43.64
Solyc06g050760.1.1	Tomato	cytosol	24.02	42.61
KRG97665	Soybean	cytosol	32.84	42.41
GSMUA_Achr10P...	Banana	cytosol	22.55	42.2
CDY00985	Canola	cytosol	35.29	42.11
PGSC0003DMT400046104	Potato	cytosol	23.04	41.96
KRH30153	Soybean	cytosol	29.41	40.82
Solyc06g048820.1.1	Tomato	cytosol	21.57	40.74
KRH31209	Soybean	cytosol	33.82	40.12
Os03t0299600-01	Rice	mitochondrion	44.61	39.91
KRH17129	Soybean	cytosol	30.39	38.75
GSMUA_Achr6P15760_001	Banana	cytosol	22.55	38.66
Os05t0342100-01	Rice	cytosol	33.33	38.42
Bra029887.1-P	Field mustard	cytosol	34.31	37.23
KRG98193	Soybean	cytosol	28.92	36.2
CDY08559	Canola	cytosol, plasma membrane	34.31	33.98
PGSC0003DMT400017004	Potato	extracellular, plasma membrane, plastid	33.33	31.92
VIT_06s0004g07550.t01	Wine grape	extracellular, vacuole	32.35	29.6

Protein Annotations

EnsemblPlants:Os05t0342000-00	EnsemblPlantsGene:Os05g0342000	Gene3D:3.10.450.50	InterPro:NTF2-like_dom_sf	InterPro:Wun1-like	PANTHER:PTHR33703
PANTHER:PTHR33703:SF9	PFAM:PF07107	ProteinID:BAS93474.1	SEG:seg	SUPFAM:SSF54427	UniParc:UPI000393884F
UniProt:A0A0P0WL04	MapMan:35.2	:	:	:	:

Description

Hypothetical conserved gene. (Os05t0342000-00)

Coordinates

chr5:-:16046996..16047764

Molecular Weight (calculated)

21311.3 Da

IEP (calculated)

7.561

GRAVY (calculated)

-0.159

Length

204 amino acids

Sequence
(BLAST)

001: CQPPPPFPPI RSIARFAAAA AELASDKVHA NGDAADAGGG GEEEVVVSSS KAVVEELYRA LERGDGDAVR RLLNPDVDWW FHGPRAHQHL VLMRLLTGGG
101: GGAAGLPFKV RGVDAFGETV LAEGTDATGK LYWVHAWTVG PGGRVTGVRE YCNTALVVTR LGGGGGGKGA EAAAPCSRSQ SEQLWQSRLP DRARKNLPAL
201: VLAI

Best Arabidopsis Sequence Match ( AT5G01740.1 )
(BLAST)

001: MEAHNVEIST RLTPEMKNQG TIELLYKALQ QGDTSTVTKV VASDVEWWFH GPHDCQHMMR LLTGEPPRQV SFRFEPSSVQ VVVPGHDCVI AEGWEGSRVY
101: WVHVWKLKDG VVTELREYFN TWLTVTDYSL GAVGWDMGRC TVWESVPRDL ARGSLPSLLL AI

Arabidopsis Description

AT5g01740/T20L15_10 [Source:UniProtKB/TrEMBL;Acc:Q9LZX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.