Factsheet for HORVU4Hr1G020000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G093390.2
HORVU3Hr1G027650.2
HORVU3Hr1G054240.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G42440.1	HORVU1Hr1G093390.2	AT2G42580.1	19000166
AT5G42440.1	HORVU3Hr1G027650.2	AT2G42580.1	19000166
AT5G42440.1	HORVU3Hr1G054240.2	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G111300.1	Wheat	plasma membrane	94.91	94.4
TraesCS4D01G109000.1	Wheat	plasma membrane	94.37	93.87
TraesCS4A01G207800.1	Wheat	plasma membrane	94.37	93.87
Zm00001d053133_P001	Maize	cytosol, peroxisome, plasma membrane	65.15	58.27
KXG27836	Sorghum	plastid	67.29	56.79
Os11t0168600-01	Rice	cytosol, plasma membrane	15.01	56.57
GSMUA_Achr10P...	Banana	plasma membrane	46.65	49.01
CDY14753	Canola	plasma membrane	44.24	45.33
CDY68216	Canola	plasma membrane	43.7	44.78
AT5G42440.1	Thale cress	golgi, plasma membrane	42.9	44.57
Bra016962.1-P	Field mustard	plasma membrane	43.43	44.51
VIT_18s0072g00170.t01	Wine grape	plasma membrane	43.16	44.23
KRH35107	Soybean	plasma membrane	43.43	44.02
KRG91688	Soybean	plasma membrane	43.16	43.4
PGSC0003DMT400064560	Potato	plasma membrane	41.55	40.68
Solyc04g071870.1.1	Tomato	plasma membrane	41.55	40.68
KRG94081	Soybean	plasma membrane	24.93	38.59
KRG94367	Soybean	plasma membrane	23.86	30.48

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.10.2	Gene3D:3.30.200.20	EMBL:AK360463	UniProt:F2D9A1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:HORVU4Hr1G020000
EnsemblPlants:HORVU4Hr1G020000.1	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF48	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0002005B3F	SEG:seg

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D9A1]

Coordinates

chrchr4H:+:96780385..96784384

Molecular Weight (calculated)

40367.2 Da

IEP (calculated)

6.795

GRAVY (calculated)

-0.094

Length

373 amino acids

Sequence
(BLAST)

001: MDAVYQALVV TVAAFVAISF PCLLLAFLCR HRNNRLLEPD HRCASSSPLP ISAPAGTSSE LSSSWSLYGS AVDSSLKKLS LDDLARATGE FSPDNIIGDG
101: SFGFVYRAVL PDGGPAVAVK RLSADHAAGA GNREFRAELE VLGSLSHRNL ARLLGYCAAG RDRLLVYELL ERGSLDAWLH GDAASLPLPW PARLRVTRGA
201: AAALAFLHHD RHPPVLHRDV KSSNVLLDEG FEAKLADFGH ARVVTGGPAA SHLSTQAAGT AGYMAPEIRE GVGASVKADV YSFGVLMMET VTGRRPSWPM
301: KNIIGKEVEL LRWAREKVEA GISSEIADHR MGLEGETETK EVKDFLDIAQ SCTEESPKYR PTMREVVERL NRL

Best Arabidopsis Sequence Match ( AT5G42440.1 )
(BLAST)

001: MDYQISLILA TSISSIFLLL IVFTVVMIVC RRRPPIQNHP RRNRNFPDPD PDLNTETVTE SFDPSICEIS MAELTIATKN FSSDLIVGDG SFGLVYRAQL
101: SNGVVVAVKK LDHDALQGFR EFAAEMDTLG RLNHPNIVRI LGYCISGSDR ILIYEFLEKS SLDYWLHETD EENSPLTWST RVNITRDVAK GLAYLHGLPK
201: PIIHRDIKSS NVLLDSDFVA HIADFGLARR IDASRSHVST QVAGTMGYMP PEYWEGNTAA TVKADVYSFG VLMLELATRR RPNLTVVVDE KEVGLAQWAV
301: IMVEQNRCYE MLDFGGVCGS EKGVEEYFRI ACLCIKESTR ERPTMVQVVE LLEELCRFM

Arabidopsis Description

At5g42440 [Source:UniProtKB/TrEMBL;Acc:Q9FIH3]
SUBAcon: [plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.