Factsheet for PGSC0003DMT400061226

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g100060.1.1	Tomato	cytosol, nucleus, plastid	96.23	95.62
VIT_18s0001g00430.t01	Wine grape	nucleus	30.19	71.64
VIT_18s0001g01260.t01	Wine grape	nucleus	30.19	71.64
VIT_06s0004g01790.t01	Wine grape	nucleus	49.06	54.93
PGSC0003DMT400017570	Potato	nucleus	50.31	42.78
GSMUA_Achr3P11070_001	Banana	nucleus	40.25	41.29
GSMUA_Achr9P19860_001	Banana	nucleus	38.36	39.35
TraesCS5A01G263500.1	Wheat	cytosol	37.74	38.96
TraesCS5B01G262900.1	Wheat	nucleus	37.74	37.04
Zm00001d020926_P001	Maize	cytosol, nucleus, plastid	37.74	36.81
HORVU7Hr1G050270.1	Barley	nucleus	37.11	36.65
OQU89687	Sorghum	nucleus	39.62	36.63
TraesCS5D01G271100.1	Wheat	nucleus	37.74	36.36
Zm00001d006016_P001	Maize	nucleus	36.48	36.02
Os09t0486500-02	Rice	nucleus	37.11	35.98
TraesCS7B01G146400.1	Wheat	nucleus	37.74	35.09
TraesCS7A01G245100.1	Wheat	nucleus	37.74	35.09
TraesCS7D01G243700.1	Wheat	nucleus	37.74	34.88
OQU80949	Sorghum	cytosol, nucleus, plastid	38.36	34.66
Zm00001d031423_P001	Maize	cytosol, nucleus, plastid	36.48	32.95
Os08t0504700-01	Rice	cytosol, nucleus, plastid	35.22	32.94
PGSC0003DMT400072393	Potato	cytosol, nucleus, peroxisome	30.19	30.19
PGSC0003DMT400017569	Potato	cytosol	30.82	29.34
PGSC0003DMT400006957	Potato	cytosol	27.67	29.33
PGSC0003DMT400035389	Potato	nucleus	30.19	28.24
PGSC0003DMT400010084	Potato	cytosol	28.93	27.71
PGSC0003DMT400086587	Potato	nucleus	21.38	27.42
PGSC0003DMT400021061	Potato	cytosol, nucleus, peroxisome	29.56	27.33
PGSC0003DMT400081478	Potato	cytosol, nucleus, plastid	28.93	26.9
HORVU5Hr1G072920.1	Barley	plastid	38.99	24.9
PGSC0003DMT400088043	Potato	cytosol	20.75	24.44
PGSC0003DMT400050131	Potato	cytosol, nucleus, plastid	27.67	24.04
PGSC0003DMT400097759	Potato	cytosol	20.13	23.7

Protein Annotations

EntrezGene:102605848	MapMan:35.1	Gene3D:4.10.1110.10	InterPro:AN1-like_Znf	GO:GO:0003674	GO:GO:0005488
GO:GO:0008270	GO:GO:0046872	InterPro:IPR000058	InterPro:IPR035896	UniProt:M1C791	PFAM:PF01428
EnsemblPlantsGene:PGSC0003DMG400023837	PGSC:PGSC0003DMG400023837	EnsemblPlants:PGSC0003DMT400061226	PFscan:PS51039	PANTHER:PTHR10634	PANTHER:PTHR10634:SF22
SMART:SM00154	SUPFAM:SSF118310	UniParc:UPI000294B505	RefSeq:XP_006365818.1	InterPro:Znf_AN1	SEG:seg

Description

Stress-associated protein 10 [Source:PGSC_GENE;Acc:PGSC0003DMG400023837]

Coordinates

chr12:-:60714780..60715549

Molecular Weight (calculated)

17547.9 Da

IEP (calculated)

9.378

GRAVY (calculated)

-0.689

Length

159 amino acids

Sequence
(BLAST)

001: MAAQKREKEE TELKVPESIP LCSPTLPVPS PSPPPTTHLS VALISDLKRS DRSSTERVDL KVSSMDDQSR STSAASPEST DLVGRKTGVK RQREANRCSG
101: IGCRRKVGLM PFRCRCGEVF CSEHRYSDRH DCSYDYKAAG REAIAKENPV VKAAKILKV

Best Arabidopsis Sequence Match ( AT3G12630.1 )
(BLAST)

001: MAQRTEKEET EFKVLETLTT TTTTLCTNNC GVTANPATNN MCQKCFNASL VSAAAGVVES GSILKRSARS VNLRSSPAKV VIRPREIDAV KKRDQQIVNR
101: CSGCRKKVGL TGFRCRCGEL FCSEHRYSDR HDCSYDYKTA GREAIARENP VVKAAKMVKV

Arabidopsis Description

SAP5Zinc finger A20 and AN1 domain-containing stress-associated protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHJ8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.