Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G12630.1 | EES01073 | AT2G42580.1 | 19000166 |
| AT3G12630.1 | EES02247 | AT2G42580.1 | 19000166 |
| AT3G12630.1 | OQU78515 | AT2G42580.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d006016_P001 | Maize | nucleus | 83.72 | 89.44 |
| Zm00001d020926_P001 | Maize | cytosol, nucleus, plastid | 77.33 | 81.6 |
| TraesCS5A01G263500.1 | Wheat | cytosol | 63.95 | 71.43 |
| Os09t0486500-02 | Rice | nucleus | 66.86 | 70.12 |
| TraesCS5B01G262900.1 | Wheat | nucleus | 64.53 | 68.52 |
| TraesCS5D01G271100.1 | Wheat | nucleus | 64.53 | 67.27 |
| OQU80949 | Sorghum | cytosol, nucleus, plastid | 65.7 | 64.2 |
| GSMUA_Achr3P11070_001 | Banana | nucleus | 53.49 | 59.35 |
| VIT_18s0001g01260.t01 | Wine grape | nucleus | 22.67 | 58.21 |
| VIT_18s0001g00430.t01 | Wine grape | nucleus | 22.67 | 58.21 |
| GSMUA_Achr9P19860_001 | Banana | nucleus | 51.16 | 56.77 |
| AT3G12630.1 | Thale cress | nucleus | 48.26 | 51.88 |
| CDY52666 | Canola | nucleus | 46.51 | 51.61 |
| CDY50536 | Canola | nucleus | 46.51 | 51.28 |
| Bra038739.1-P | Field mustard | nucleus | 46.51 | 51.28 |
| CDY67538 | Canola | nucleus | 47.09 | 50.94 |
| CDY08419 | Canola | nucleus | 47.09 | 50.94 |
| Bra034748.1-P | Field mustard | nucleus | 47.09 | 50.94 |
| KRH13914 | Soybean | cytosol, nucleus, plastid | 47.09 | 50.31 |
| KRH43492 | Soybean | cytosol, nucleus, plastid | 47.67 | 50.0 |
| CDX73811 | Canola | nucleus | 45.93 | 49.69 |
| CDY00788 | Canola | cytosol, nucleus, plastid | 44.77 | 49.68 |
| Bra001461.1-P | Field mustard | nucleus | 45.35 | 49.06 |
| VIT_13s0064g01220.t01 | Wine grape | nucleus | 48.26 | 48.26 |
| KRH20843 | Soybean | plastid | 38.37 | 48.18 |
| Solyc01g086960.2.1 | Tomato | nucleus | 51.74 | 47.34 |
| PGSC0003DMT400017570 | Potato | nucleus | 50.0 | 45.99 |
| KRH27497 | Soybean | cytosol, nucleus, plastid | 36.05 | 45.93 |
| HORVU5Hr1G072920.1 | Barley | plastid | 64.53 | 44.58 |
| EES05173 | Sorghum | cytosol, mitochondrion, nucleus | 37.79 | 43.33 |
| VIT_06s0004g01790.t01 | Wine grape | nucleus | 34.88 | 42.25 |
| KXG20351 | Sorghum | cytosol | 40.12 | 40.35 |
| Solyc12g100060.1.1 | Tomato | cytosol, nucleus, plastid | 37.21 | 40.0 |
| PGSC0003DMT400061226 | Potato | cytosol, nucleus, plastid | 36.63 | 39.62 |
| KXG29703 | Sorghum | cytosol | 38.95 | 39.18 |
| KXG34474 | Sorghum | nucleus, peroxisome, plastid | 38.37 | 38.37 |
| OQU90855 | Sorghum | nucleus | 36.05 | 34.44 |
| EES03677 | Sorghum | peroxisome, plastid | 33.72 | 33.14 |
| OQU88500 | Sorghum | mitochondrion | 31.98 | 29.41 |
| OQU76503 | Sorghum | peroxisome | 24.42 | 24.14 |
| EES13895 | Sorghum | nucleus | 32.56 | 21.54 |
| OQU80520 | Sorghum | cytosol | 33.14 | 21.27 |
| EES13894 | Sorghum | cytosol | 30.81 | 21.2 |
Protein Annotations
| MapMan:35.1 | Gene3D:4.10.1110.10 | EntrezGene:8055868 | InterPro:AN1-like_Znf | UniProt:C5X3V8 | ProteinID:EER96968.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0008270 | GO:GO:0046872 |
| InterPro:IPR000058 | InterPro:IPR002653 | InterPro:IPR035896 | ProteinID:OQU89685.1 | ProteinID:OQU89686.1 | EnsemblPlants:OQU89687 |
| ProteinID:OQU89687 | ProteinID:OQU89687.1 | PFAM:PF01428 | PFAM:PF01754 | PFscan:PS51036 | PFscan:PS51039 |
| PANTHER:PTHR10634 | PANTHER:PTHR10634:SF64 | SMART:SM00154 | SMART:SM00259 | EnsemblPlantsGene:SORBI_3002G245800 | SUPFAM:SSF118310 |
| SUPFAM:SSF57716 | unigene:Sbi.11613 | UniParc:UPI0001A837A4 | RefSeq:XP_002460447.1 | InterPro:Znf_A20 | InterPro:Znf_AN1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:63410050..63413846
Molecular Weight (calculated)
17846.9 Da
IEP (calculated)
8.726
GRAVY (calculated)
-0.230
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQRDKKEEP TELRAPEITL CANNCGFPGN PATQNLCQSC FSAATASRSS SPSSPTSSSS ASAVSQPRPA ALVDAAAVEL LASADAAAVG QSMEVVAAAP
101: AATAARSSAV NRCSSCRKRV GLTGFRCRCG ELFCGAHRYS DRHGCSYDYK GAGRDAIARE NPVVRAAKIV RF
101: AATAARSSAV NRCSSCRKRV GLTGFRCRCG ELFCGAHRYS DRHGCSYDYK GAGRDAIARE NPVVRAAKIV RF
001: MAQRTEKEET EFKVLETLTT TTTTLCTNNC GVTANPATNN MCQKCFNASL VSAAAGVVES GSILKRSARS VNLRSSPAKV VIRPREIDAV KKRDQQIVNR
101: CSGCRKKVGL TGFRCRCGEL FCSEHRYSDR HDCSYDYKTA GREAIARENP VVKAAKMVKV
101: CSGCRKKVGL TGFRCRCGEL FCSEHRYSDR HDCSYDYKTA GREAIARENP VVKAAKMVKV
Arabidopsis Description
SAP5Zinc finger A20 and AN1 domain-containing stress-associated protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHJ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.