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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os06t0612800-01 Rice cytosol 83.04 83.04
GSMUA_Achr1P19600_001 Banana cytosol 68.42 82.39
TraesCS7B01G303900.1 Wheat cytosol 79.53 80.47
TraesCS7A01G404300.1 Wheat cytosol 79.53 80.47
Zm00001d046767_P002 Maize cytosol 94.15 80.1
TraesCS7D01G397700.1 Wheat cytosol 78.95 79.88
GSMUA_Achr7P06320_001 Banana cytosol 67.84 79.45
KXG29703 Sorghum cytosol 78.95 78.95
GSMUA_Achr9P27570_001 Banana cytosol, mitochondrion, nucleus 47.37 72.97
GSMUA_Achr3P11830_001 Banana plastid 43.27 72.55
VIT_08s0007g07950.t01 Wine grape cytosol, nucleus, plastid 72.51 72.09
KRH29694 Soybean cytosol 70.76 69.14
KRH24692 Soybean cytosol 70.18 68.97
GSMUA_AchrUn_... Banana cytosol, extracellular, nucleus, plastid 38.6 66.67
Solyc01g014180.2.1 Tomato nucleus 66.67 66.67
PGSC0003DMT400035389 Potato nucleus 66.08 66.47
Solyc11g061770.1.1 Tomato nucleus 65.5 65.88
GSMUA_Achr9P22330_001 Banana cytosol 63.16 65.85
KRH23151 Soybean nucleus 65.5 65.12
PGSC0003DMT400081478 Potato cytosol, nucleus, plastid 64.91 64.91
KRH10187 Soybean nucleus 64.33 63.95
Bra014276.1-P Field mustard cytosol 28.07 60.0
CDY25219 Canola cytosol, nucleus, plastid 56.14 57.14
CDY22831 Canola cytosol, nucleus, plastid 56.14 57.14
Bra018900.1-P Field mustard cytosol, nucleus, plastid 56.14 57.14
AT1G51200.2 Thale cress cytosol, nucleus, plastid 56.14 55.49
CDY60839 Canola nucleus, plastid 52.05 54.27
Bra014278.1-P Field mustard nucleus 54.97 52.81
EES05173 Sorghum cytosol, mitochondrion, nucleus 38.01 43.33
KXG34474 Sorghum nucleus, peroxisome, plastid 42.69 42.44
OQU89687 Sorghum nucleus 40.35 40.12
OQU88500 Sorghum mitochondrion 40.35 36.9
OQU80949 Sorghum cytosol, nucleus, plastid 36.26 35.23
EES03677 Sorghum peroxisome, plastid 34.5 33.71
OQU90855 Sorghum nucleus 32.16 30.56
EES13894 Sorghum cytosol 32.75 22.4
OQU76503 Sorghum peroxisome 22.22 21.84
OQU80520 Sorghum cytosol 33.33 21.27
EES13895 Sorghum nucleus 29.24 19.23
Protein Annotations
MapMan:35.1Gene3D:4.10.1110.10UniProt:A0A194YK74InterPro:AN1-like_ZnfGO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0005488GO:GO:0008270GO:GO:0046872InterPro:IPR000058InterPro:IPR002653
InterPro:IPR035896EnsemblPlants:KXG20351ProteinID:KXG20351ProteinID:KXG20351.1ProteinID:KXG20352.1PFAM:PF01428
PFAM:PF01754PFscan:PS51036PFscan:PS51039PANTHER:PTHR10634PANTHER:PTHR10634:SF30SMART:SM00154
SMART:SM00259EnsemblPlantsGene:SORBI_3010G190600SUPFAM:SSF118310SUPFAM:SSF57716UniParc:UPI0001CAB7EAInterPro:Znf_A20
InterPro:Znf_AN1:::::
Description
hypothetical protein
Coordinates
chr10:+:53203941..53206205
Molecular Weight (calculated)
18224.0 Da
IEP (calculated)
8.208
GRAVY (calculated)
-0.205
Length
171 amino acids
Sequence
(BLAST)
001: MEHKETGCQA PEGPILCINN CGFFGSAATM NMCSKCHKEM IMKQEQAKLA ASSIDSIVNG NDAVMEPVVA GNTVVAAAPI ELQTMNVQPA DVAGPSEGAA
101: VISKGKVGPN RCSTCRKRVG LTGFNCRCGN LYCALHRYSD KHDCKFDYRT AARDAIAKAN PVVKADKLDK I
Best Arabidopsis Sequence Match ( AT1G51200.2 )
(BLAST)
001: MDHDKTGCQS PPEGPKLCTN NCGFFGSAAT MNMCSKCHKD MLFQQEQGAK FASAVSGTSS SSNIIKETFT AALVDIETKS VEPMTVSVQP SSVQVVAEVV
101: APEEAAKPKG PSRCTTCNKR VGLTGFKCRC GSLFCGTHRY ADVHDCSFNY HAAAQEAIAK ANPVVKAEKL DKI
Arabidopsis Description
SAP2Zinc finger A20 and AN1 domain-containing stress-associated protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X0]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.