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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
cytosol: 18205020
gfp PMID: 18205020 doi
V Kanneganti, AK Gupta
Department of Plant Biotechnology, Madurai Kamaraj University, Madurai, 625021, TamilNadu, India.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os02t0195600-01 Rice cytosol 85.38 84.39
TraesCS7B01G303900.1 Wheat cytosol 82.46 83.43
GSMUA_Achr1P19600_001 Banana cytosol 69.01 83.1
KXG20351 Sorghum cytosol 83.04 83.04
TraesCS7D01G397700.1 Wheat cytosol 81.87 82.84
TraesCS7A01G404300.1 Wheat cytosol 81.87 82.84
GSMUA_Achr7P06320_001 Banana cytosol 69.59 81.51
GSMUA_Achr9P27570_001 Banana cytosol, mitochondrion, nucleus 48.54 74.77
VIT_08s0007g07950.t01 Wine grape cytosol, nucleus, plastid 74.85 74.42
GSMUA_Achr3P11830_001 Banana plastid 43.86 73.53
Zm00001d046767_P002 Maize cytosol 82.46 70.15
GSMUA_Achr9P22330_001 Banana cytosol 66.08 68.9
KRH29694 Soybean cytosol 70.18 68.57
KRH24692 Soybean cytosol 69.59 68.39
Solyc11g061770.1.1 Tomato nucleus 67.25 67.65
PGSC0003DMT400035389 Potato nucleus 67.25 67.65
KRH23151 Soybean nucleus 67.25 66.86
KRH10187 Soybean nucleus 66.67 66.28
GSMUA_AchrUn_... Banana cytosol, extracellular, nucleus, plastid 38.01 65.66
Solyc01g014180.2.1 Tomato nucleus 64.33 64.33
PGSC0003DMT400081478 Potato cytosol, nucleus, plastid 62.57 62.57
Bra014276.1-P Field mustard cytosol 28.07 60.0
CDY25219 Canola cytosol, nucleus, plastid 55.56 56.55
AT1G51200.2 Thale cress cytosol, nucleus, plastid 56.14 55.49
Bra018900.1-P Field mustard cytosol, nucleus, plastid 54.39 55.36
CDY22831 Canola cytosol, nucleus, plastid 54.39 55.36
CDY60839 Canola nucleus, plastid 52.63 54.88
Bra014278.1-P Field mustard nucleus 55.56 53.37
Os07t0168800-01 Rice nucleus, peroxisome, plastid 42.11 44.72
Os03t0792900-01 Rice nucleus, peroxisome, plastid 40.94 43.75
Os01t0718000-01 Rice cytosol, nucleus, plastid 36.84 42.57
Os02t0530300-01 Rice cytosol, nucleus, plastid 36.84 40.91
Os09t0486500-02 Rice nucleus 38.01 39.63
Os08t0504700-01 Rice cytosol, nucleus, plastid 37.43 37.65
Os03t0793000-01 Rice nucleus 36.26 36.69
Os07t0169500-00 Rice cytosol, peroxisome, plastid 30.99 34.87
Os05t0299700-01 Rice nucleus 28.07 27.59
Os08t0436400-00 Rice nucleus 30.99 23.66
Os01t0765900-00 Rice nucleus 39.18 18.87
Os01t0717601-00 Rice cytosol, nucleus 22.81 16.53
Os03t0793300-01 Rice nucleus 12.87 9.28
Protein Annotations
MapMan:35.1Gene3D:4.10.1110.10EntrezGene:4341520UniProt:A3BDI8EMBL:AK060008EMBL:AK069720
EMBL:AK104175EMBL:AK104562EMBL:AK104605InterPro:AN1-like_ZnfProteinID:BAD35521.1ProteinID:BAD35553.1
ProteinID:BAF19980.1ProteinID:BAS98606.1ProteinID:EAZ37627.1GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488GO:GO:0008270GO:GO:0046872InterPro:IPR000058InterPro:IPR002653InterPro:IPR035896
EnsemblPlantsGene:Os06g0612800EnsemblPlants:Os06t0612800-01PFAM:PF01428PFAM:PF01754PFscan:PS51036PFscan:PS51039
PANTHER:PTHR10634PANTHER:PTHR10634:SF30SMART:SM00154SMART:SM00259SUPFAM:SSF118310SUPFAM:SSF57716
UniParc:UPI0000403809RefSeq:XP_015643189.1InterPro:Znf_A20InterPro:Znf_AN1::
Description
STRESS ASSOCIATED PROTEIN GENE 8Similar to PVPR3 protein. (Os06t0612800-01);Similar to cDNA clone:006-301-C11, full insert sequence. (Os06t0612800-02)
Coordinates
chr6:+:24491993..24493907
Molecular Weight (calculated)
18403.1 Da
IEP (calculated)
8.048
GRAVY (calculated)
-0.384
Length
171 amino acids
Sequence
(BLAST)
001: MEHKETGCQQ PEGPILCINN CGFFGSAATM NMCSKCHKEM IMKQEQAKLA ASSIDSIVNG GDSGKEPIIA GHAEVAVAQV EVKTLVAQPA EIAGPSEGVT
101: VNPKGREGPN RCSTCRKRVG LTGFNCRCGN LYCAMHRYSD KHDCQFDYRT AARDAIAKAN PVVKAEKLDK I
Best Arabidopsis Sequence Match ( AT1G51200.2 )
(BLAST)
001: MDHDKTGCQS PPEGPKLCTN NCGFFGSAAT MNMCSKCHKD MLFQQEQGAK FASAVSGTSS SSNIIKETFT AALVDIETKS VEPMTVSVQP SSVQVVAEVV
101: APEEAAKPKG PSRCTTCNKR VGLTGFKCRC GSLFCGTHRY ADVHDCSFNY HAAAQEAIAK ANPVVKAEKL DKI
Arabidopsis Description
SAP2Zinc finger A20 and AN1 domain-containing stress-associated protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X0]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.