CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20843	Soybean	plastid	91.85	90.51
KRH13914	Soybean	cytosol, nucleus, plastid	62.96	52.8
KRH43492	Soybean	cytosol, nucleus, plastid	62.96	51.83
GSMUA_Achr3P11070_001	Banana	nucleus	54.81	47.74
GSMUA_Achr9P19860_001	Banana	nucleus	47.41	41.29
TraesCS5A01G263500.1	Wheat	cytosol	45.93	40.26
Os09t0486500-02	Rice	nucleus	48.15	39.63
TraesCS5B01G262900.1	Wheat	nucleus	45.93	38.27
HORVU7Hr1G050270.1	Barley	nucleus	45.19	37.89
TraesCS5D01G271100.1	Wheat	nucleus	45.93	37.58
Zm00001d020926_P001	Maize	cytosol, nucleus, plastid	43.7	36.2
OQU89687	Sorghum	nucleus	45.93	36.05
Zm00001d006016_P001	Maize	nucleus	42.96	36.02
TraesCS7B01G146400.1	Wheat	nucleus	44.44	35.09
TraesCS7A01G245100.1	Wheat	nucleus	44.44	35.09
TraesCS7D01G243700.1	Wheat	nucleus	44.44	34.88
Os08t0504700-01	Rice	cytosol, nucleus, plastid	43.7	34.71
OQU80949	Sorghum	cytosol, nucleus, plastid	45.19	34.66
Zm00001d031423_P001	Maize	cytosol, nucleus, plastid	44.44	34.09
KRH04053	Soybean	cytosol	29.63	31.01
KRH23151	Soybean	nucleus	37.78	29.65
KRH67896	Soybean	cytosol, nucleus, plastid	34.81	29.38
KRH29694	Soybean	cytosol	37.78	29.14
KRH24692	Soybean	cytosol	37.04	28.74
KRH57322	Soybean	cytosol, extracellular, nucleus	25.93	28.46
KRG96184	Soybean	cytosol, nucleus, plastid	34.07	28.05
KRH26620	Soybean	nucleus	32.59	27.85
KRH66998	Soybean	nucleus	34.81	27.65
KRG95321	Soybean	cytosol	34.81	27.33
KRH10187	Soybean	nucleus	34.81	27.33
KRH32726	Soybean	cytosol, nucleus, plastid	35.56	27.12
KRH30848	Soybean	nucleus	34.07	26.74
HORVU5Hr1G072920.1	Barley	plastid	45.93	24.9
KRH09258	Soybean	cytosol, extracellular, nucleus, plastid	24.44	23.24
KRH30019	Soybean	cytosol	23.7	22.38
KRH38756	Soybean	nucleus, plastid	24.44	21.29
KRH01118	Soybean	cytosol	22.96	20.81

Protein Annotations

EntrezGene:100787421	MapMan:35.1	Gene3D:4.10.1110.10	EMBL:ACUP02007810	InterPro:AN1-like_Znf	EnsemblPlantsGene:GLYMA_12G238400
GO:GO:0003674	GO:GO:0005488	GO:GO:0008270	GO:GO:0046872	InterPro:IPR000058	InterPro:IPR035896
UniProt:K7LWN0	EnsemblPlants:KRH27497	ProteinID:KRH27497	ProteinID:KRH27497.1	PFAM:PF01428	PFscan:PS51039
PANTHER:PTHR10634	PANTHER:PTHR10634:SF22	SMART:SM00154	SUPFAM:SSF118310	UniParc:UPI0001CA9768	InterPro:Znf_AN1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:+:39743972..39745323

Molecular Weight (calculated)

15000.6 Da

IEP (calculated)

8.583

GRAVY (calculated)

-0.693

Length

135 amino acids

Sequence
(BLAST)

001: MAQKAEKNDT DFKVPETIIT PCTTTTATSI TEPSRFFDAT TPATSSRSPK RSLPLDDESQ TDQTASSEPK RVVSRCSCCR RRVGLTGFRC RCGDLFCAEH
101: RYSDRHDCSY DYKAAGREAI ARENPVVKAA KIVKV

Best Arabidopsis Sequence Match ( AT3G12630.1 )
(BLAST)

001: MAQRTEKEET EFKVLETLTT TTTTLCTNNC GVTANPATNN MCQKCFNASL VSAAAGVVES GSILKRSARS VNLRSSPAKV VIRPREIDAV KKRDQQIVNR
101: CSGCRKKVGL TGFRCRCGEL FCSEHRYSDR HDCSYDYKTA GREAIARENP VVKAAKMVKV

Arabidopsis Description

SAP5Zinc finger A20 and AN1 domain-containing stress-associated protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHJ8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.