Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G277500.1 | Wheat | cytosol, nucleus, peroxisome | 51.05 | 52.9 |
| Os07t0169500-00 | Rice | cytosol, peroxisome, plastid | 42.66 | 40.13 |
| Bra010753.1-P | Field mustard | cytosol | 32.17 | 35.38 |
| CDX90265 | Canola | cytosol | 32.17 | 35.38 |
| CDY65025 | Canola | cytosol | 32.17 | 35.38 |
| AT4G14225.1 | Thale cress | cytosol, mitochondrion, plastid | 30.77 | 35.2 |
| GSMUA_Achr9P17970_001 | Banana | cytosol, mitochondrion, nucleus | 33.57 | 34.04 |
| GSMUA_Achr9P07600_001 | Banana | nucleus | 33.57 | 34.04 |
| AT4G25380.1 | Thale cress | nucleus | 30.77 | 33.85 |
| CDY49709 | Canola | cytosol | 30.77 | 33.59 |
| Bra019169.1-P | Field mustard | cytosol | 30.77 | 33.59 |
| Solyc07g055090.1.1 | Tomato | cytosol, nucleus, peroxisome | 30.07 | 32.58 |
| CDY57287 | Canola | cytosol | 30.77 | 32.35 |
| CDX92701 | Canola | cytosol | 30.07 | 31.85 |
| PGSC0003DMT400097759 | Potato | cytosol | 29.37 | 31.11 |
| PGSC0003DMT400086587 | Potato | nucleus | 26.57 | 30.65 |
| PGSC0003DMT400088043 | Potato | cytosol | 28.67 | 30.37 |
| KRH38756 | Soybean | nucleus, plastid | 30.77 | 28.39 |
| VIT_01s0011g02290.t01 | Wine grape | nucleus | 30.07 | 27.92 |
| VIT_16s0022g01980.t01 | Wine grape | nucleus | 29.37 | 27.63 |
| KRH09258 | Soybean | cytosol, extracellular, nucleus, plastid | 27.27 | 27.46 |
| VIT_16s0022g01680.t01 | Wine grape | nucleus | 29.37 | 17.57 |
Protein Annotations
| MapMan:35.1 | Gene3D:4.10.1110.10 | InterPro:AN1-like_Znf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0008270 | InterPro:IPR000058 | InterPro:IPR002653 | InterPro:IPR035896 | PFAM:PF01754 |
| PFscan:PS51039 | PANTHER:PTHR10634 | PANTHER:PTHR10634:SF40 | SMART:SM00154 | SMART:SM00259 | SUPFAM:SSF118310 |
| SUPFAM:SSF57716 | EnsemblPlantsGene:TraesCSU01G028600 | EnsemblPlants:TraesCSU01G028600.1 | InterPro:Znf_A20 | InterPro:Znf_AN1 | SEG:seg |
Description
No Description!
Coordinates
chrUn:+:27634848..27636324
Molecular Weight (calculated)
15134.2 Da
IEP (calculated)
8.361
GRAVY (calculated)
-0.069
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MEARQHAGGA APCANGCGFF GGGAATNDLC SNCYKEQQLL DLMAFDGAVM SGLRSLRLAK AGGVEETPER TAGATKNRCD ACQQTVGLLG FVCRWWATAT
101: CCGAHRHAGA HVCFFDYKAA GREQVARKNP LVVAPKMARI SCF
101: CCGAHRHAGA HVCFFDYKAA GREQVARKNP LVVAPKMARI SCF
001: MAEEHRCETP EGHRLCVNNC GFFGSSATMN LCSNCYGDLC LKQQQQASMK STVESSLSPV IAPVLENYAA ELEIPTTKKT EEKKPIQIPT EQPSPPQRPN
101: RCTVCRKRVG LTGFMCRCGT TFCGSHRYPE VHGCTFDFKS AGREEIAKAN PLVIAAKLQK I
101: RCTVCRKRVG LTGFMCRCGT TFCGSHRYPE VHGCTFDFKS AGREEIAKAN PLVIAAKLQK I
Arabidopsis Description
SAP4Zinc finger A20 and AN1 domain-containing stress-associated protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJM6]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.