Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G189900.1 | Wheat | nucleus | 94.38 | 94.97 |
| HORVU2Hr1G036250.1 | Barley | nucleus | 88.12 | 89.24 |
| TraesCS6D01G387600.1 | Wheat | peroxisome | 85.62 | 80.59 |
| TraesCS2D01G133000.1 | Wheat | cytosol, nucleus, plastid | 79.38 | 80.38 |
| TraesCS2D01G133200.1 | Wheat | peroxisome | 79.38 | 79.38 |
| TraesCS2D01G133100.1 | Wheat | peroxisome | 76.25 | 78.21 |
| TraesCS5D01G437800.1 | Wheat | mitochondrion, nucleus, peroxisome | 42.5 | 46.26 |
| TraesCS2D01G246800.2 | Wheat | peroxisome | 48.75 | 45.88 |
| TraesCS2D01G215700.1 | Wheat | peroxisome | 38.75 | 45.59 |
| Solyc07g055090.1.1 | Tomato | cytosol, nucleus, peroxisome | 37.5 | 45.45 |
| TraesCS5D01G436300.1 | Wheat | plastid | 43.12 | 45.39 |
| AT4G14225.1 | Thale cress | cytosol, mitochondrion, plastid | 33.12 | 42.4 |
| CDY65025 | Canola | cytosol | 33.75 | 41.54 |
| Bra010753.1-P | Field mustard | cytosol | 33.75 | 41.54 |
| CDX90265 | Canola | cytosol | 33.75 | 41.54 |
| PGSC0003DMT400088043 | Potato | cytosol | 35.0 | 41.48 |
| PGSC0003DMT400097759 | Potato | cytosol | 35.0 | 41.48 |
| PGSC0003DMT400086587 | Potato | nucleus | 31.88 | 41.13 |
| TraesCS5D01G438600.1 | Wheat | nucleus | 41.88 | 41.1 |
| TraesCS5D01G438400.1 | Wheat | nucleus | 41.25 | 40.74 |
| TraesCS3D01G246600.1 | Wheat | cytosol | 34.38 | 40.44 |
| KRH09258 | Soybean | cytosol, extracellular, nucleus, plastid | 35.62 | 40.14 |
| TraesCS5D01G436400.1 | Wheat | nucleus | 43.75 | 39.33 |
| KRH38756 | Soybean | nucleus, plastid | 36.88 | 38.06 |
| GSMUA_Achr9P17970_001 | Banana | cytosol, mitochondrion, nucleus | 33.12 | 37.59 |
| GSMUA_Achr9P07600_001 | Banana | nucleus | 33.12 | 37.59 |
| VIT_16s0022g01980.t01 | Wine grape | nucleus | 33.12 | 34.87 |
| Os08t0436400-00 | Rice | nucleus | 48.75 | 34.82 |
| AT4G25380.1 | Thale cress | nucleus | 28.12 | 34.62 |
| TraesCS7D01G397700.1 | Wheat | cytosol | 36.25 | 34.32 |
| TraesCS7D01G243700.1 | Wheat | nucleus | 35.62 | 33.14 |
| CDY49709 | Canola | cytosol | 26.88 | 32.82 |
| Bra019169.1-P | Field mustard | cytosol | 26.88 | 32.82 |
| VIT_01s0011g02290.t01 | Wine grape | nucleus | 31.25 | 32.47 |
| TraesCS6D01G154100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 38.75 | 32.46 |
| TraesCS5D01G271100.1 | Wheat | nucleus | 33.12 | 32.12 |
| CDY57287 | Canola | cytosol | 26.88 | 31.62 |
| CDX92701 | Canola | cytosol | 26.25 | 31.11 |
| EES13894 | Sorghum | cytosol | 46.25 | 29.6 |
| OQU80520 | Sorghum | cytosol | 48.12 | 28.73 |
| TraesCS1D01G131000.1 | Wheat | cytosol, extracellular, nucleus | 24.38 | 25.32 |
| EES13895 | Sorghum | nucleus | 40.62 | 25.0 |
| VIT_16s0022g01680.t01 | Wine grape | nucleus | 30.0 | 20.08 |
Protein Annotations
| MapMan:35.1 | Gene3D:4.10.1110.10 | InterPro:AN1-like_Znf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0008270 | InterPro:IPR000058 | InterPro:IPR002653 | InterPro:IPR035896 | PFAM:PF01428 |
| PFAM:PF01754 | PFscan:PS51036 | PFscan:PS51039 | PANTHER:PTHR10634 | PANTHER:PTHR10634:SF35 | SMART:SM00154 |
| SMART:SM00259 | SUPFAM:SSF118310 | SUPFAM:SSF57716 | EnsemblPlantsGene:TraesCS2D01G198000 | EnsemblPlants:TraesCS2D01G198000.1 | InterPro:Znf_A20 |
| InterPro:Znf_AN1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2D:-:145682869..145683351
Molecular Weight (calculated)
16667.0 Da
IEP (calculated)
8.706
GRAVY (calculated)
-0.161
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQGQESSTQ AAAAPALCAN GCGFYGSAAT KNMCSKCYLE HLKATDTAAP AVEGKTKIKA DVASLAFNLK TSLSLQDSAA AAATEAPTAE APAKKAAPSR
101: CMACKKKVGL LGFACRCGGT FCSLHRYVDG HACDFDYKKV DREKIAQQNP LIAPSKIDKI
101: CMACKKKVGL LGFACRCGGT FCSLHRYVDG HACDFDYKKV DREKIAQQNP LIAPSKIDKI
001: MAEEHRCETP EGHRLCVNNC GFFGSSATMN LCSNCYGDLC LKQQQQASMK STVESSLSPV IAPVLENYAA ELEIPTTKKT EEKKPIQIPT EQPSPPQRPN
101: RCTVCRKRVG LTGFMCRCGT TFCGSHRYPE VHGCTFDFKS AGREEIAKAN PLVIAAKLQK I
101: RCTVCRKRVG LTGFMCRCGT TFCGSHRYPE VHGCTFDFKS AGREEIAKAN PLVIAAKLQK I
Arabidopsis Description
SAP4Zinc finger A20 and AN1 domain-containing stress-associated protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJM6]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.