Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26566 | Canola | nucleus | 77.38 | 83.87 |
| Bra026970.1-P | Field mustard | nucleus | 76.79 | 83.23 |
| CDY16005 | Canola | nucleus | 77.98 | 82.39 |
| KRH57322 | Soybean | cytosol, extracellular, nucleus | 44.05 | 60.16 |
| AT4G22820.2 | Thale cress | cytosol, nucleus, plastid | 61.9 | 59.09 |
| KRH04053 | Soybean | cytosol | 45.24 | 58.91 |
| AT4G12040.1 | Thale cress | cytosol, nucleus, plastid | 61.31 | 58.86 |
| VIT_02s0025g05050.t01 | Wine grape | nucleus | 59.52 | 58.14 |
| VIT_02s0025g05080.t01 | Wine grape | cytosol | 31.55 | 53.0 |
| Solyc08g079700.1.1 | Tomato | cytosol | 44.64 | 45.45 |
| PGSC0003DMT400010084 | Potato | cytosol | 44.05 | 44.58 |
| AT2G36320.1 | Thale cress | cytosol, nucleus, plastid | 41.67 | 43.48 |
| AT3G52800.2 | Thale cress | nucleus | 42.26 | 41.76 |
| AT4G14225.1 | Thale cress | cytosol, mitochondrion, plastid | 30.95 | 41.6 |
| AT2G27580.1 | Thale cress | cytosol, mitochondrion, nucleus | 39.88 | 41.1 |
| AT1G51200.2 | Thale cress | cytosol, nucleus, plastid | 39.88 | 38.73 |
| AT4G25380.1 | Thale cress | nucleus | 28.57 | 36.92 |
| AT3G12630.1 | Thale cress | nucleus | 29.76 | 31.25 |
Protein Annotations
| PDB:1WFP | MapMan:35.1 | Gene3D:4.10.1110.10 | EntrezGene:837801 | UniProt:A0A178WB83 | ProteinID:AAF79653.1 |
| ProteinID:AEE28882.1 | ProteinID:AEE28883.1 | InterPro:AN1-like_Znf | ProteinID:ANM58832.1 | ArrayExpress:AT1G12440 | EnsemblPlantsGene:AT1G12440 |
| RefSeq:AT1G12440 | TAIR:AT1G12440 | RefSeq:AT1G12440-TAIR-G | EnsemblPlants:AT1G12440.2 | TAIR:AT1G12440.2 | EMBL:BT010824 |
| EMBL:BT011299 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008270 | GO:GO:0046872 | InterPro:IPR000058 | InterPro:IPR002653 | InterPro:IPR035896 | RefSeq:NP_001321241.1 |
| RefSeq:NP_172706.1 | RefSeq:NP_849652.1 | ProteinID:OAP14755.1 | PFAM:PF01428 | PFAM:PF01754 | PO:PO:0000293 |
| PFscan:PS51036 | PFscan:PS51039 | PANTHER:PTHR10634 | PANTHER:PTHR10634:SF38 | UniProt:Q6NNI8 | SMART:SM00154 |
| SMART:SM00259 | SUPFAM:SSF118310 | SUPFAM:SSF57716 | UniParc:UPI0000162D41 | InterPro:Znf_A20 | InterPro:Znf_AN1 |
| SEG:seg | : | : | : | : | : |
Description
SAP1Zinc finger A20 and AN1 domain-containing stress-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NNI8]
Coordinates
chr1:-:4241421..4242963
Molecular Weight (calculated)
17820.9 Da
IEP (calculated)
8.720
GRAVY (calculated)
-0.645
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSEQNDSTS FSPSEPKLCV KGCGFFGSPS NMNLCSKCYR DIRATEEQTA SAKAAVEKSL NPNKPKTQPQ QSQEITQGVL GSGSSSSSTR GGDSAAAPLD
101: PPKSTATRCL SCNKKVGVTG FKCRCGSTFC GTHRYPESHE CQFDFKGVAR EAIAKANPVV KADKVDRI
101: PPKSTATRCL SCNKKVGVTG FKCRCGSTFC GTHRYPESHE CQFDFKGVAR EAIAKANPVV KADKVDRI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.