Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019645.1-P | Field mustard | cytosol, nucleus, plastid | 98.16 | 98.16 |
| CDX95378 | Canola | cytosol, nucleus, plastid | 88.34 | 93.51 |
| CDX67537 | Canola | cytosol, nucleus, plastid | 81.6 | 88.67 |
| CDY13347 | Canola | nucleus | 78.53 | 83.12 |
| CDX73602 | Canola | cytosol, nucleus, plastid | 80.37 | 81.37 |
| CDX79670 | Canola | nucleus | 74.23 | 80.13 |
| CDX84565 | Canola | cytosol, nucleus, plastid | 76.07 | 77.5 |
| CDX84135 | Canola | cytosol, nucleus, plastid | 69.33 | 75.84 |
| AT3G52800.2 | Thale cress | nucleus | 77.91 | 74.71 |
| CDX75051 | Canola | cytosol, nucleus, plastid | 71.17 | 71.17 |
| GSMUA_Achr3P22730_001 | Banana | cytosol, mitochondrion, nucleus | 52.76 | 63.24 |
| VIT_08s0007g03530.t01 | Wine grape | nucleus | 58.9 | 59.63 |
| GSMUA_Achr6P17330_001 | Banana | nucleus | 51.53 | 58.33 |
| KRH30848 | Soybean | nucleus | 58.9 | 55.81 |
| KRH67896 | Soybean | cytosol, nucleus, plastid | 54.6 | 55.62 |
| KRG96184 | Soybean | cytosol, nucleus, plastid | 55.83 | 55.49 |
| GSMUA_Achr8P07710_001 | Banana | cytosol, mitochondrion, nucleus | 50.92 | 54.97 |
| KRH32726 | Soybean | cytosol, nucleus, plastid | 59.51 | 54.8 |
| EES05173 | Sorghum | cytosol, mitochondrion, nucleus | 47.85 | 52.0 |
| PGSC0003DMT400050131 | Potato | cytosol, nucleus, plastid | 54.6 | 48.63 |
| Os02t0530300-01 | Rice | cytosol, nucleus, plastid | 45.4 | 48.05 |
| KRH30019 | Soybean | cytosol | 41.1 | 46.85 |
| CDY39818 | Canola | nucleus | 31.9 | 46.85 |
| CDY26566 | Canola | nucleus | 44.17 | 46.45 |
| CDY16005 | Canola | nucleus | 44.17 | 45.28 |
| CDY03251 | Canola | nucleus | 38.65 | 44.68 |
| CDY22831 | Canola | cytosol, nucleus, plastid | 45.4 | 44.05 |
| CDY25219 | Canola | cytosol, nucleus, plastid | 45.4 | 44.05 |
| CDY60839 | Canola | nucleus, plastid | 44.17 | 43.9 |
| CDX94483 | Canola | plastid | 42.94 | 42.94 |
| CDX83273 | Canola | cytosol, mitochondrion, nucleus | 43.56 | 42.77 |
| CDY31184 | Canola | cytosol, mitochondrion, nucleus | 44.17 | 42.6 |
| CDX86725 | Canola | nucleus, plastid | 42.33 | 42.33 |
| CDY65025 | Canola | cytosol | 31.9 | 40.0 |
| CDX90265 | Canola | cytosol | 31.9 | 40.0 |
| CDY49709 | Canola | cytosol | 31.9 | 39.69 |
| CDY57287 | Canola | cytosol | 32.52 | 38.97 |
| CDX92701 | Canola | cytosol | 31.29 | 37.78 |
| CDY08419 | Canola | nucleus | 35.58 | 36.48 |
| CDY52666 | Canola | nucleus | 34.36 | 36.13 |
| CDY00788 | Canola | cytosol, nucleus, plastid | 34.36 | 36.13 |
| CDY50536 | Canola | nucleus | 34.36 | 35.9 |
| CDY67538 | Canola | nucleus | 34.97 | 35.85 |
| CDX73811 | Canola | nucleus | 34.97 | 35.85 |
| CDY04388 | Canola | cytosol | 14.11 | 33.33 |
| CDY00455 | Canola | cytosol | 14.11 | 33.33 |
| EES03677 | Sorghum | peroxisome, plastid | 35.58 | 33.14 |
| CDY51557 | Canola | nucleus | 40.49 | 30.41 |
| CDX98772 | Canola | cytosol, extracellular, nucleus | 42.94 | 23.97 |
| Os01t0765900-00 | Rice | nucleus | 41.1 | 18.87 |
Protein Annotations
| MapMan:35.1 | Gene3D:4.10.1110.10 | GO:A0A078JLG3 | UniProt:A0A078JLG3 | InterPro:AN1-like_Znf | EnsemblPlants:CDY66222 |
| ProteinID:CDY66222 | ProteinID:CDY66222.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0008270 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00052329001 | InterPro:IPR000058 | InterPro:IPR002653 | InterPro:IPR035896 |
| PFAM:PF01428 | PFAM:PF01754 | PFscan:PS51036 | PFscan:PS51039 | PANTHER:PTHR10634 | PANTHER:PTHR10634:SF43 |
| SMART:SM00154 | SMART:SM00259 | SUPFAM:SSF118310 | SUPFAM:SSF57716 | UniParc:UPI0004EF4AB4 | InterPro:Znf_A20 |
| InterPro:Znf_AN1 | SEG:seg | : | : | : | : |
Description
BnaAnng21800DBnaAnng21800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JLG3]
Coordinates
chrLK035151:-:4696..5533
Molecular Weight (calculated)
17597.2 Da
IEP (calculated)
8.694
GRAVY (calculated)
-0.379
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEHRCQTP EGHRLCANNC GFLGSSATMN LCSNCYGDLC LKQQQQGSSS LSAVSPPPPV ITSISTPMIQ PLVQNPSAEL EVPAKNVSVT VTATEQPQKR
101: PNRCTTCRKR VGLTGFKCRC GTTFCGAHRY PEVHGCTFDF KSAGREEIAK ANPLVKAAKL QKI
101: PNRCTTCRKR VGLTGFKCRC GTTFCGAHRY PEVHGCTFDF KSAGREEIAK ANPLVKAAKL QKI
001: MAEEHRCQTP ESNRLCVNNC GFLGSSATMN LCSNCYGDLC LKQQQQSSSI KSTVESSLSV SPPSSSSSEI SSPIIPPLLK NPSVKLEVPE KKAVISLPTT
101: EQNQQQRPNR CTTCRKRVGL TGFKCRCGTM FCGVHRYPEI HGCSYDFKSA GREEIAKANP LVKAAKLQKI
101: EQNQQQRPNR CTTCRKRVGL TGFKCRCGTM FCGVHRYPEI HGCSYDFKSA GREEIAKANP LVKAAKLQKI
Arabidopsis Description
SAP6A20/AN1-like zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VIF4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.