Factsheet for Bra000505.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003473.1-P
Bra014421.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G27580.1	Bra003473.1-P	AT3G61790.1	21798944
AT2G27580.1	Bra014421.1-P	AT3G61790.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83273	Canola	cytosol, mitochondrion, nucleus	98.79	98.19
CDY31184	Canola	cytosol, mitochondrion, nucleus	94.55	92.31
AT2G27580.1	Thale cress	cytosol, mitochondrion, nucleus	80.0	80.98
Bra014276.1-P	Field mustard	cytosol	24.85	51.25
GSMUA_Achr3P22730_001	Banana	cytosol, mitochondrion, nucleus	40.61	49.26
GSMUA_Achr6P17330_001	Banana	nucleus	41.21	47.22
Bra023061.1-P	Field mustard	cytosol, nucleus, plastid	44.24	45.62
Bra036643.1-P	Field mustard	nucleus	30.3	45.05
Bra005282.1-P	Field mustard	nucleus	43.64	44.72
Bra026970.1-P	Field mustard	nucleus	41.21	43.87
GSMUA_Achr8P07710_001	Banana	cytosol, mitochondrion, nucleus	40.0	43.71
Bra019645.1-P	Field mustard	cytosol, nucleus, plastid	43.03	43.56
PGSC0003DMT400006957	Potato	cytosol	38.79	42.67
Bra006949.1-P	Field mustard	cytosol, nucleus, plastid	45.45	42.61
Bra015203.1-P	Field mustard	plastid	27.88	42.59
Bra018900.1-P	Field mustard	cytosol, nucleus, plastid	43.03	42.26
Solyc09g009590.1.1	Tomato	cytosol	38.18	41.72
Bra033124.1-P	Field mustard	nucleus, plastid	42.42	40.7
EES05173	Sorghum	cytosol, mitochondrion, nucleus	36.97	40.67
Bra028533.1-P	Field mustard	cytosol, nucleus, plastid	45.45	40.11
Solyc10g083460.1.1	Tomato	nucleus, peroxisome, plastid	38.18	39.62
Bra029435.1-P	Field mustard	plastid	41.82	39.43
Bra014278.1-P	Field mustard	nucleus	42.42	39.33
PGSC0003DMT400072393	Potato	cytosol, nucleus, peroxisome	37.58	38.99
Os02t0530300-01	Rice	cytosol, nucleus, plastid	35.76	38.31
Bra019169.1-P	Field mustard	cytosol	30.3	38.17
Bra010753.1-P	Field mustard	cytosol	29.09	36.92
Bra017832.1-P	Field mustard	nucleus	27.88	35.94
Bra028223.1-P	Field mustard	nucleus	27.88	35.66
Bra038739.1-P	Field mustard	nucleus	30.91	32.69
Bra001461.1-P	Field mustard	nucleus	30.91	32.08
EES03677	Sorghum	peroxisome, plastid	33.94	32.0
Bra034748.1-P	Field mustard	nucleus	30.3	31.45
Bra023869.1-P	Field mustard	plastid	22.42	25.34
Bra019354.1-P	Field mustard	cytosol, extracellular, nucleus	40.0	22.6
Os01t0765900-00	Rice	nucleus	34.55	16.06

Protein Annotations

MapMan:35.1	Gene3D:4.10.1110.10	InterPro:AN1-like_Znf	EnsemblPlantsGene:Bra000505	EnsemblPlants:Bra000505.1	EnsemblPlants:Bra000505.1-P
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0008270	GO:GO:0046872
InterPro:IPR000058	InterPro:IPR002653	InterPro:IPR035896	UniProt:M4C8H7	PFAM:PF01428	PFAM:PF01754
PFscan:PS51036	PFscan:PS51039	PANTHER:PTHR10634	PANTHER:PTHR10634:SF47	SMART:SM00154	SMART:SM00259
SUPFAM:SSF118310	SUPFAM:SSF57716	UniParc:UPI0002540025	InterPro:Znf_A20	InterPro:Znf_AN1	SEG:seg

Description

AT2G27580 (E=4e-068) | zinc finger (AN1-like) family protein

Coordinates

chrA03:+:11471969..11472466

Molecular Weight (calculated)

18437.8 Da

IEP (calculated)

8.211

GRAVY (calculated)

-0.812

Length

165 amino acids

Sequence
(BLAST)

001: MSEEHRLQEP RLCANDCGFF GNTATQNLCS KCFRDLKHEQ ENSSTAKNAL KQTLAACVAS SSSVSPPPPP PPSDLKEVNT ENPEKRAAAS EPEEEELKPP
101: QDPKRCLTCR RRVGITGFRC RCGFVFCGTH RYAEQHECTF DFKRVGKEKI AKANPIVKAD KLEKI

Best Arabidopsis Sequence Match ( AT2G27580.1 )
(BLAST)

001: MAEEHRLQEP RLCANNCGFF GSTATQNLCS KCFRDLQHQE QNSSTAKHAL TQSLAAVGAA ASSSVSPPPP PPADSKEIVE AKSEKRAAAE PEEADGPPQD
101: PKRCLTCRRR VGITGFRCRC GFVFCGTHRY AEQHECSFDF KRMGKDKIAK ANPIVKADKL EKI

Arabidopsis Description

SAP3Zinc finger A20 and AN1 domain-containing stress-associated protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNU9]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.