Factsheet for Bra015203.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1
nucleus 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017832.1-P	Field mustard	nucleus	98.15	82.81
Bra028223.1-P	Field mustard	nucleus	98.15	82.17
CDY00455	Canola	cytosol	40.74	63.77
CDY04388	Canola	cytosol	37.96	59.42
Bra033124.1-P	Field mustard	nucleus, plastid	88.89	55.81
Bra029435.1-P	Field mustard	plastid	83.33	51.43
AT4G12040.1	Thale cress	cytosol, nucleus, plastid	80.56	49.71
Bra036643.1-P	Field mustard	nucleus	40.74	39.64
Bra026970.1-P	Field mustard	nucleus	55.56	38.71
Bra023869.1-P	Field mustard	plastid	51.85	38.36
Bra014276.1-P	Field mustard	cytosol	27.78	37.5
Bra005282.1-P	Field mustard	nucleus	42.59	28.57
Bra023061.1-P	Field mustard	cytosol, nucleus, plastid	41.67	28.12
Bra000505.1-P	Field mustard	cytosol, mitochondrion, nucleus	42.59	27.88
Bra010753.1-P	Field mustard	cytosol	33.33	27.69
Bra019645.1-P	Field mustard	cytosol, nucleus, plastid	41.67	27.61
Bra019169.1-P	Field mustard	cytosol	32.41	26.72
Bra006949.1-P	Field mustard	cytosol, nucleus, plastid	43.52	26.7
Bra001461.1-P	Field mustard	nucleus	37.96	25.79
Bra019354.1-P	Field mustard	cytosol, extracellular, nucleus	69.44	25.68
Bra018900.1-P	Field mustard	cytosol, nucleus, plastid	39.81	25.6
Bra038739.1-P	Field mustard	nucleus	36.11	25.0
Bra034748.1-P	Field mustard	nucleus	36.11	24.53
Bra014278.1-P	Field mustard	nucleus	39.81	24.16
Bra028533.1-P	Field mustard	cytosol, nucleus, plastid	40.74	23.53

Protein Annotations

EnsemblPlants:Bra015203.1	EnsemblPlants:Bra015203.1-P	EnsemblPlantsGene:Bra015203	Gene3D:4.10.1110.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0008270	GO:GO:0046872	InterPro:AN1-like_Znf	InterPro:IPR000058	InterPro:IPR035896	InterPro:Znf_AN1
PANTHER:PTHR10634	PANTHER:PTHR10634:SF38	PFAM:PF01428	PFscan:PS51039	SMART:SM00154	SUPFAM:SSF118310
UniParc:UPI000254465D	UniProt:M4DFD1	MapMan:35.1	:	:	:

Description

AT4G12040 (E=4e-036) | zinc finger (AN1-like) family protein

Coordinates

chrA10:-:3521840..3522331

Molecular Weight (calculated)

11923.1 Da

IEP (calculated)

8.335

GRAVY (calculated)

-0.746

Length

108 amino acids

Sequence
(BLAST)

001: MNSEQNNSTS FPPTEPELCD NRCAEPSSAP IATGQEEAEP SKPARTNRCF SCNKKAGVMG FKCKCGSTFC RSHRCPEKHE CSFNFKEVGR DVIAKANHVI
101: KADKVVRI

Best Arabidopsis Sequence Match ( AT4G12040.1 )
(BLAST)

001: MGSEENNSTS FPPTEPKLCD NGCGFFGSPS NMNLCSKCYR SLRAEEDQTA VAKAAVKNSL KLPSCSIIAP GQKHPLEIKP AHLETVVVTA EPSSVPVAAE
101: QDEAEPSRPV RPNNRCFSCN KKVGVMGFKC KCGSTFCGSH RYPEKHECSF DFKEVGRDAI AKANPLVKAD KVQRI

Arabidopsis Description

SAP7SAP7 [Source:UniProtKB/TrEMBL;Acc:A0A178V0G6]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.