Factsheet for Bra019354.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus, cytosol

Predictor Summary:

nucleus 3
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, nucleus
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98772	Canola	cytosol, extracellular, nucleus	99.66	99.66
AT4G22820.2	Thale cress	cytosol, nucleus, plastid	51.03	84.66
Bra029435.1-P	Field mustard	plastid	41.78	69.71
Bra015203.1-P	Field mustard	plastid	25.68	69.44
Bra033124.1-P	Field mustard	nucleus, plastid	40.07	68.02
Bra026970.1-P	Field mustard	nucleus	33.9	63.87
Bra017832.1-P	Field mustard	nucleus	26.71	60.94
Bra028223.1-P	Field mustard	nucleus	26.71	60.47
Bra023869.1-P	Field mustard	plastid	26.03	52.05
Bra036643.1-P	Field mustard	nucleus	18.49	48.65
Bra005282.1-P	Field mustard	nucleus	24.32	44.1
Bra023061.1-P	Field mustard	cytosol, nucleus, plastid	23.97	43.75
Bra014276.1-P	Field mustard	cytosol	11.64	42.5
Bra019645.1-P	Field mustard	cytosol, nucleus, plastid	23.63	42.33
Bra006949.1-P	Field mustard	cytosol, nucleus, plastid	25.34	42.05
Bra010753.1-P	Field mustard	cytosol	18.15	40.77
Bra019169.1-P	Field mustard	cytosol	18.15	40.46
Bra000505.1-P	Field mustard	cytosol, mitochondrion, nucleus	22.6	40.0
Bra028533.1-P	Field mustard	cytosol, nucleus, plastid	24.66	38.5
Bra018900.1-P	Field mustard	cytosol, nucleus, plastid	21.58	37.5
Bra014278.1-P	Field mustard	nucleus	21.23	34.83
Bra001461.1-P	Field mustard	nucleus	17.81	32.7
Bra038739.1-P	Field mustard	nucleus	17.47	32.69
Bra034748.1-P	Field mustard	nucleus	17.47	32.08

Protein Annotations

MapMan:35.1	Gene3D:4.10.1110.10	InterPro:AN1-like_Znf	EnsemblPlantsGene:Bra019354	EnsemblPlants:Bra019354.1	EnsemblPlants:Bra019354.1-P
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0008270	GO:GO:0046872
InterPro:IPR000058	InterPro:IPR002653	InterPro:IPR035896	UniProt:M4DS61	PFAM:PF01428	PFAM:PF01754
PFscan:PS51036	PFscan:PS51039	PANTHER:PTHR10634	PANTHER:PTHR10634:SF38	SMART:SM00154	SMART:SM00259
SUPFAM:SSF118310	SUPFAM:SSF57716	UniParc:UPI0002540E05	InterPro:Znf_A20	InterPro:Znf_AN1	SEG:seg

Description

AT4G22820 (E=2e-066) | zinc finger (AN1-like) family protein

Coordinates

chrA03:-:24744545..24748194

Molecular Weight (calculated)

31990.1 Da

IEP (calculated)

7.707

GRAVY (calculated)

-0.455

Length

292 amino acids

Sequence
(BLAST)

001: MYQNLMNICV SAGNLEAHYL RGMQEYFQNE NMAAGLELLE IAAQGSYDNA IYLYGIIMLC RGDPDIRKPQ LDSLGWRENK ARSDACWQSI KTSLHGVMVK
101: RGRNLTVPTG RMGSEQNDST SFTQSSEPKL CANGCGFFGS PSNMDLCSKC YRDICAEEAQ TAVAKAAVEK SFKPSPSPPP PTLFIAEPDV AKPEKEKAVA
201: TVLVVAEPSS ATGEATVPEQ NEPPSKPARP NRCLCCNKKV GILGFKCKCG STFCGEHRYP ERHDCSFDFK EAGRGEIAKA NPVIKADKLQ RF

Best Arabidopsis Sequence Match ( AT4G22820.2 )
(BLAST)

001: MGSEQNDSTS FTQSQASEPK LCVKGCGFFG SPSNMDLCSK CYRGICAEEA QTAVAKAAVE KSFKPSPPRS LFIAEPPAVV VEPKPEKAAV VVVSAEPSSS
101: AVPEANEPSR PARTNRCLCC NKKVGIMGFK CKCGSTFCGE HRYPETHDCS FDFKEVGRGE IAKANPVVKA DKIQRF

Arabidopsis Description

SAP9Zinc finger A20 and AN1 domain-containing stress-associated protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O49663]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.