Factsheet for Bra038442.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
cytosol 1
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000267.1-P
Bra004709.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G14130.1	Bra000267.1-P	AT2G42580.1	19000166
AT4G14130.1	Bra004709.1-P	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27126	Canola	extracellular	99.31	99.31
AT4G14130.1	Thale cress	extracellular	91.35	91.35
CDY12366	Canola	extracellular	86.51	88.03
Bra014975.1-P	Field mustard	extracellular, vacuole	86.85	86.25
VIT_05s0062g00610.t01	Wine grape	cytosol	72.32	78.87
VIT_05s0062g00480.t01	Wine grape	cytosol	71.63	78.11
KRH31558	Soybean	nucleus	72.66	76.09
KRG97361	Soybean	nucleus	73.36	75.99
VIT_05s0062g00250.t01	Wine grape	extracellular	71.97	74.55
VIT_05s0062g00240.t01	Wine grape	extracellular	72.32	74.38
Solyc12g098610.1.1	Tomato	nucleus	67.13	74.33
PGSC0003DMT400056316	Potato	extracellular	70.93	74.28
Solyc09g092520.2.1	Tomato	nucleus	70.59	73.91
KRH58823	Soybean	extracellular, nucleus	71.97	73.5
KRH42721	Soybean	extracellular, nucleus	71.97	73.5
PGSC0003DMT400011902	Potato	extracellular	67.82	70.25
Bra008806.1-P	Field mustard	extracellular	61.25	61.67
Bra013922.1-P	Field mustard	extracellular	61.25	61.67
Bra020434.1-P	Field mustard	extracellular	60.55	61.4
Bra024089.1-P	Field mustard	extracellular	59.17	61.29
Bra002722.1-P	Field mustard	extracellular	59.86	60.92
Bra011179.1-P	Field mustard	extracellular	59.17	60.64
Bra002719.1-P	Field mustard	extracellular	59.17	60.42
Bra020436.1-P	Field mustard	extracellular	57.09	58.3
Bra013923.1-P	Field mustard	extracellular	57.09	58.1
Bra002723.1-P	Field mustard	extracellular	56.4	56.99
Bra019141.1-P	Field mustard	extracellular	56.4	56.99
Bra020433.1-P	Field mustard	extracellular	51.21	56.92
Bra038819.1-P	Field mustard	cytosol, extracellular, nucleus	44.98	54.39
Bra020432.1-P	Field mustard	extracellular	51.56	52.65
Bra008796.1-P	Field mustard	cytosol, extracellular, nucleus	50.52	52.33
Bra006814.1-P	Field mustard	extracellular	56.4	51.1
Bra006220.1-P	Field mustard	vacuole	51.56	50.85
Bra013164.1-P	Field mustard	extracellular	50.17	49.15
Bra000840.1-P	Field mustard	extracellular	46.37	46.21
Bra024415.1-P	Field mustard	extracellular	43.94	44.56
Bra017855.1-P	Field mustard	extracellular, vacuole	44.98	44.52
Bra011066.1-P	Field mustard	extracellular	44.29	43.84
Bra019846.1-P	Field mustard	extracellular	42.56	41.14
Bra040716.1-P	Field mustard	vacuole	41.18	40.07
Bra034193.1-P	Field mustard	cytosol	44.98	37.79

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	EnsemblPlantsGene:Bra038442	EnsemblPlants:Bra038442.1	EnsemblPlants:Bra038442.1-P	InterPro:ConA-like_dom_sf
InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762
GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555
InterPro:IPR000757	UniProt:M4FBH6	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034
PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF62	SUPFAM:SSF49899	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0002546751	InterPro:XET_C	InterPro:XTH	SEG:seg	:	:

Description

AT4G14130 (E=6e-158) XTR7 | XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase

Coordinates

chrA08:-:8711857..8712905

Molecular Weight (calculated)

33027.2 Da

IEP (calculated)

9.712

GRAVY (calculated)

-0.374

Length

289 amino acids

Sequence
(BLAST)

001: MGQSSSFTTV MVAVLLVMMF GSAYSGNFFN EFDLTWGDHR GKIFNGGNML SLSLDRVSGS GFKSKKEYLF GRIDMQLKLV AGNSAGTVTT YYLSSQGATH
101: DEIDFEFLGN ETGKPYVLHT NVFAQGKGNR EQQFYLWFDP TKNFHTYSIV WRPQHIIFLV DNLPIRVFNN AEKLGVPFPK NQPMRIYSSL WNADDWATRG
201: GLVKTDWSKA PFTAYYRGFN AAACTVSSGC DPKFKTSLSD SELQTANELN AYGRRRLRWV QKYFMIYNYC SDLKRFPRGF PPECRRSRV

Best Arabidopsis Sequence Match ( AT4G14130.1 )
(BLAST)

001: MGPSSSLTTI VATVLLVTLF GSAYASNFFD EFDLTWGDHR GKIFNGGNML SLSLDQVSGS GFKSKKEYLF GRIDMQLKLV AGNSAGTVTA YYLSSQGATH
101: DEIDFEFLGN ETGKPYVLHT NVFAQGKGDR EQQFYLWFDP TKNFHTYSIV WRPQHIIFLV DNLPIRVFNN AEKLGVPFPK SQPMRIYSSL WNADDWATRG
201: GLVKTDWSKA PFTAYYRGFN AAACTASSGC DPKFKSSFGD GKLQVATELN AYGRRRLRWV QKYFMIYNYC SDLKRFPRGF PPECKKSRV

Arabidopsis Description

XTH15Xyloglucan endotransglucosylase/hydrolase protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q38911]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.