Factsheet for Bra006814.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88627	Canola	extracellular	88.09	98.25
CDY11863	Canola	extracellular	87.46	97.55
Bra002723.1-P	Field mustard	extracellular	85.58	95.45
AT5G57540.1	Thale cress	extracellular	83.39	93.66
AT5G57530.1	Thale cress	extracellular	82.76	92.63
Bra020436.1-P	Field mustard	extracellular	82.13	92.58
Bra013923.1-P	Field mustard	extracellular	70.53	79.23
Bra019141.1-P	Field mustard	extracellular	68.97	76.92
GSMUA_Achr10P...	Banana	cytosol	44.51	71.36
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	42.01	69.43
GSMUA_Achr3P05220_001	Banana	cytosol	43.57	66.83
GSMUA_Achr9P13820_001	Banana	cytosol	43.57	66.51
GSMUA_Achr5P21880_001	Banana	cytosol	43.57	65.26
GSMUA_Achr7P16430_001	Banana	cytosol	42.95	64.32
Os06t0697000-02	Rice	extracellular	55.17	60.69
TraesCS7D01G418700.1	Wheat	cytosol, mitochondrion, nucleus	42.32	60.54
HORVU7Hr1G098320.3	Barley	vacuole	54.55	60.21
TraesCS7D01G419300.1	Wheat	extracellular	54.23	59.66
Bra020434.1-P	Field mustard	extracellular	53.29	59.65
HORVU0Hr1G022110.1	Barley	extracellular, vacuole	54.55	59.59
TraesCS7A01G426900.1	Wheat	extracellular	53.29	59.44
TraesCS7A01G427000.1	Wheat	extracellular	53.29	59.44
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	36.68	59.39
Bra002719.1-P	Field mustard	extracellular	52.66	59.36
TraesCS7B01G327000.1	Wheat	extracellular	54.23	59.25
TraesCS7A01G426100.1	Wheat	vacuole	53.6	59.17
TraesCS7B01G327200.1	Wheat	extracellular	52.98	59.09
TraesCS7D01G419200.1	Wheat	extracellular	52.98	59.09
TraesCS7D01G419100.1	Wheat	extracellular	53.29	59.03
Bra008806.1-P	Field mustard	extracellular	52.98	58.88
Bra013922.1-P	Field mustard	extracellular	52.98	58.88
TraesCS7A01G426600.1	Wheat	vacuole	53.29	58.62
HORVU7Hr1G098260.1	Barley	vacuole	53.6	58.56
TraesCS7B01G326900.1	Wheat	extracellular	52.98	58.48
Bra002722.1-P	Field mustard	extracellular	52.04	58.45
TraesCS7A01G426700.1	Wheat	extracellular	52.66	58.13
Bra020433.1-P	Field mustard	extracellular	47.02	57.69
Bra024089.1-P	Field mustard	extracellular	49.84	56.99
PGSC0003DMT400048242	Potato	extracellular	49.84	56.99
Bra011179.1-P	Field mustard	extracellular	50.16	56.74
EER90303	Sorghum	extracellular, golgi, vacuole	53.29	56.48
Bra038442.1-P	Field mustard	extracellular	51.1	56.4
Zm00001d014617_P001	Maize	extracellular	52.35	56.04
Solyc07g006870.2.1	Tomato	extracellular, vacuole	49.53	56.03
Bra014975.1-P	Field mustard	extracellular, vacuole	51.1	56.01
EER88885	Sorghum	extracellular	51.1	55.82
TraesCS7D01G418600.1	Wheat	vacuole	55.49	55.49
TraesCS7D01G419900.1	Wheat	extracellular	49.84	55.4
Os06t0696400-01	Rice	extracellular	50.78	55.29
TraesCS7A01G427600.1	Wheat	extracellular	49.84	55.02
HORVU7Hr1G098440.2	Barley	extracellular	49.22	54.9
TraesCS7B01G327700.1	Wheat	extracellular	49.84	54.83
Bra020432.1-P	Field mustard	extracellular	48.28	54.42
Zm00001d014613_P001	Maize	plasma membrane	49.22	54.14
Zm00001d009309_P001	Maize	extracellular, vacuole	46.08	53.07
Bra038819.1-P	Field mustard	cytosol, extracellular, nucleus	39.19	52.3
Bra008796.1-P	Field mustard	cytosol, extracellular, nucleus	42.01	48.03
Bra006220.1-P	Field mustard	vacuole	42.32	46.08
Bra013164.1-P	Field mustard	extracellular	42.32	45.76
Bra011066.1-P	Field mustard	extracellular	41.07	44.86
Bra024415.1-P	Field mustard	extracellular	38.87	43.51
Bra040716.1-P	Field mustard	vacuole	40.44	43.43
Bra017855.1-P	Field mustard	extracellular, vacuole	39.5	43.15
HORVU7Hr1G098280.1	Barley	extracellular, mitochondrion, vacuole	53.92	43.0
Bra000840.1-P	Field mustard	extracellular	38.24	42.07
Bra019846.1-P	Field mustard	extracellular	39.19	41.81
Bra034193.1-P	Field mustard	cytosol	36.99	34.3

Protein Annotations

MapMan:50.2.4	EnsemblPlantsGene:Bra006814	EnsemblPlants:Bra006814.1	EnsemblPlants:Bra006814.1-P	InterPro:ConA-like_dom_sf	InterPro:GH16
InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0010411	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016740
GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046
GO:GO:0071555	InterPro:IPR000757	UniProt:M4CRH3	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604
ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF20	SUPFAM:SSF49899	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000253FCA0	InterPro:XET_C	InterPro:XTH	SEG:seg	:

Description

AT5G57530 (E=9e-115) | xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative

Coordinates

chrA03:+:5162341..5163582

Molecular Weight (calculated)

36296.2 Da

IEP (calculated)

5.343

GRAVY (calculated)

-0.134

Length

319 amino acids

Sequence
(BLAST)

001: MAAFATKQSM LLLSLSLLLL IGVSTGSFYD NFDITWGNGR ANIFESGQLL TCTLDKISGS GFQSKKEDLF GKIDMKMKLV AGNSAGTVTA YYTTYVKINI
101: YLLFTFKFCG IGCMILNLTL RMFSQLSSKG ETWDEIDFEF LGNVTGQPYV LHTNVFTGGK GNREMQFYLW FDPTADFHTY TVLWDPLNII FLVDGIPIRV
201: FKNNEAHDVA YPKSQPMKIY SSLWEADDWA TQGGRVKTDW TNAPFSASYR SFNDVDCCSR TSVWNWVTCN ANSNSWMWTT LNSNQLGQMK WVQDDYMIYN
301: YCNDLKRFPQ GLPTECNLG

Best Arabidopsis Sequence Match ( AT5G57530.1 )
(BLAST)

001: MAAFATKQSP LLLASLLILI GVATGSFYDS FDITWGAGRA NIFESGQLLT CTLDKTSGSG FQSKKEYLFG KIDMKIKLVP GNSAGTVTAY YLSSKGETWD
101: EIDFEFLGNV TGQPYVIHTN VFTGGKGNRE MQFYLWFDPT ADFHTYTVLW NPLNIIFLVD GIPIRVFKNN EANGVAYPKS QPMKIYSSLW EADDWATQGG
201: KVKTDWTNAP FSASYRSFND VDCCSRTSIW NWVTCNANSN SWMWTTLNSN QLGQLKWVQK DYMIYNYCTD FKRFPQGLPT ECNLN

Arabidopsis Description

XTH12Probable xyloglucan endotransglucosylase/hydrolase protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKL9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.