Factsheet for GSMUA_Achr3P05220_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, extracellular
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	82.69	89.12
GSMUA_Achr9P13820_001	Banana	cytosol	89.42	89.0
GSMUA_Achr7P16430_001	Banana	cytosol	88.94	86.85
GSMUA_Achr5P21880_001	Banana	cytosol	87.5	85.45
GSMUA_Achr10P...	Banana	cytosol	81.25	84.92
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	73.56	77.67
TraesCS7D01G418700.1	Wheat	cytosol, mitochondrion, nucleus	77.88	72.65
GSMUA_Achr8P15560_001	Banana	cytosol, extracellular, nucleus	66.83	65.88
TraesCS7A01G426900.1	Wheat	extracellular	78.37	56.99
HORVU7Hr1G098320.3	Barley	vacuole	78.85	56.75
TraesCS7D01G419200.1	Wheat	extracellular	77.88	56.64
TraesCS7D01G419100.1	Wheat	extracellular	78.37	56.6
TraesCS7B01G327200.1	Wheat	extracellular	77.4	56.29
TraesCS7A01G427000.1	Wheat	extracellular	77.4	56.29
Os06t0697000-02	Rice	extracellular	78.37	56.21
HORVU0Hr1G022110.1	Barley	extracellular, vacuole	78.85	56.16
TraesCS7A01G426100.1	Wheat	vacuole	77.88	56.06
TraesCS7D01G419300.1	Wheat	extracellular	77.88	55.86
TraesCS7A01G426600.1	Wheat	vacuole	77.4	55.52
TraesCS7A01G426700.1	Wheat	extracellular	76.92	55.36
TraesCS7B01G326900.1	Wheat	extracellular	76.92	55.36
TraesCS7B01G327000.1	Wheat	extracellular	77.4	55.14
HORVU7Hr1G098260.1	Barley	vacuole	76.44	54.45
EER90303	Sorghum	extracellular, golgi, vacuole	78.37	54.15
VIT_11s0052g01230.t01	Wine grape	cytosol	72.12	53.96
Os06t0696400-01	Rice	extracellular	75.96	53.92
Zm00001d014617_P001	Maize	extracellular	76.44	53.36
CDY02738	Canola	extracellular, nucleus, vacuole	54.81	53.02
AT5G57550.1	Thale cress	extracellular	72.12	52.82
HORVU7Hr1G098440.2	Barley	extracellular	72.6	52.8
GSMUA_Achr10P...	Banana	extracellular	71.15	52.48
EER88885	Sorghum	extracellular	73.56	52.4
TraesCS7D01G419900.1	Wheat	extracellular	72.12	52.26
TraesCS7A01G427600.1	Wheat	extracellular	72.6	52.25
TraesCS7B01G327700.1	Wheat	extracellular	72.6	52.07
Bra020434.1-P	Field mustard	extracellular	71.15	51.93
GSMUA_Achr10P...	Banana	extracellular	71.63	51.74
Zm00001d014613_P001	Maize	plasma membrane	72.12	51.72
GSMUA_Achr6P30850_001	Banana	extracellular	69.71	51.42
Bra002722.1-P	Field mustard	extracellular	70.19	51.41
GSMUA_Achr9P11180_001	Banana	extracellular, vacuole	69.23	51.25
CDY25904	Canola	extracellular	69.71	51.06
CDY67778	Canola	extracellular	69.71	51.06
TraesCS7D01G418600.1	Wheat	vacuole	77.4	50.47
Zm00001d009309_P001	Maize	extracellular, vacuole	66.83	50.18
Solyc07g006870.2.1	Tomato	extracellular, vacuole	67.31	49.65
PGSC0003DMT400048242	Potato	extracellular	66.35	49.46
CDY11863	Canola	extracellular	67.79	49.3
AT5G57530.1	Thale cress	extracellular	67.31	49.12
CDX88627	Canola	extracellular	67.31	48.95
AT5G57540.1	Thale cress	extracellular	66.35	48.59
CDY67488	Canola	extracellular	65.87	48.41
Bra020436.1-P	Field mustard	extracellular	65.87	48.41
CDY67779	Canola	extracellular	66.35	48.25
Bra002723.1-P	Field mustard	extracellular	66.35	48.25
AT4G25820.1	Thale cress	extracellular	65.87	47.74
Bra013923.1-P	Field mustard	extracellular	64.9	47.54
CDY69806	Canola	extracellular	64.9	47.54
CDY50186	Canola	extracellular	63.94	46.5
CDX92733	Canola	extracellular	63.94	46.5
Bra019141.1-P	Field mustard	extracellular	63.94	46.5
GSMUA_Achr8P34300_001	Banana	cytosol	59.62	45.26
GSMUA_Achr8P19740_001	Banana	extracellular	57.21	44.24
Bra006814.1-P	Field mustard	extracellular	66.83	43.57
GSMUA_Achr3P03390_001	Banana	extracellular	60.58	42.86
GSMUA_Achr8P26470_001	Banana	extracellular	55.77	40.56
HORVU7Hr1G098280.1	Barley	extracellular, mitochondrion, vacuole	77.88	40.5
GSMUA_Achr9P29980_001	Banana	extracellular, vacuole	51.92	40.45
GSMUA_Achr6P19100_001	Banana	extracellular, vacuole	52.4	40.37
PGSC0003DMT400048240	Potato	golgi	66.35	40.35
GSMUA_Achr1P08500_001	Banana	extracellular	52.4	40.22
GSMUA_Achr8P05120_001	Banana	extracellular	55.29	40.21
GSMUA_Achr3P26220_001	Banana	extracellular	54.81	39.86
Solyc07g006850.1.1	Tomato	golgi	65.38	39.77
GSMUA_Achr1P10380_001	Banana	extracellular, vacuole	56.25	39.66
GSMUA_Achr7P10940_001	Banana	extracellular	52.88	39.57
GSMUA_Achr5P19320_001	Banana	vacuole	53.85	39.44
GSMUA_Achr1P14290_001	Banana	vacuole	52.4	36.82
GSMUA_Achr7P02620_001	Banana	endoplasmic reticulum, extracellular	49.52	23.3

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043
GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0048046
GO:GO:0071555	EnsemblPlantsGene:GSMUA_Achr3G05220_001	EnsemblPlants:GSMUA_Achr3P05220_001	EnsemblPlants:GSMUA_Achr3T05220_001	InterPro:IPR000757	UniProt:M0SBZ0
PFAM:PF00722	PFAM:PF06955	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF20
SUPFAM:SSF49899	UniParc:UPI0002963C6E	InterPro:XET_C	SEG:seg	:	:

Description

Probable xyloglucan endotransglucosylase/hydrolase protein 23 [Source:GMGC_GENE;Acc:GSMUA_Achr3G05220_001]

Coordinates

chr3:-:3386844..3387772

Molecular Weight (calculated)

23746.9 Da

IEP (calculated)

8.302

GRAVY (calculated)

-0.565

Length

208 amino acids

Sequence
(BLAST)

001: MQIKLVPGNS AGTVTAYYLS SQGPTHDEID FEFLGNLSGD PYTLHTNVFT QGKGNREMQF KLWFDPTEDF HTYSILWNPR HVIFMVDGTP IRDFKNLESR
101: GIAFPKNQPM RIYSSLWNAD DWATRGGLVK TDWSKAPFVA SYRNFNADAC VRGSSKCGGS TKSGWWNQEL DLSSQGRMRW VQKNYMIYNY CNDAKRFPQG
201: LPPECAIA

Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)

001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V

Arabidopsis Description

XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.