Factsheet for PGSC0003DMT400048242

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g006870.2.1	Tomato	extracellular, vacuole	93.91	92.91
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	49.46	71.5
GSMUA_Achr10P...	Banana	cytosol	49.46	69.35
GSMUA_Achr9P13820_001	Banana	cytosol	49.82	66.51
GSMUA_Achr3P05220_001	Banana	cytosol	49.46	66.35
GSMUA_Achr5P21880_001	Banana	cytosol	49.82	65.26
VIT_11s0052g01230.t01	Wine grape	cytosol	63.44	63.67
GSMUA_Achr7P16430_001	Banana	cytosol	48.39	63.38
PGSC0003DMT400038413	Potato	extracellular	64.87	63.29
PGSC0003DMT400036329	Potato	extracellular	63.08	62.41
AT5G57550.1	Thale cress	extracellular	63.44	62.32
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	43.73	61.93
TraesCS7D01G418700.1	Wheat	cytosol, mitochondrion, nucleus	49.1	61.44
CDY25904	Canola	extracellular	62.37	61.27
PGSC0003DMT400056316	Potato	extracellular	60.57	61.23
Bra002722.1-P	Field mustard	extracellular	62.01	60.92
CDY67778	Canola	extracellular	62.01	60.92
Bra020434.1-P	Field mustard	extracellular	61.65	60.35
Os06t0697000-02	Rice	extracellular	62.72	60.34
TraesCS7D01G419300.1	Wheat	extracellular	62.72	60.34
HORVU7Hr1G098320.3	Barley	vacuole	62.37	60.21
TraesCS7D01G419200.1	Wheat	extracellular	61.65	60.14
TraesCS7B01G327200.1	Wheat	extracellular	61.65	60.14
TraesCS7D01G419100.1	Wheat	extracellular	62.01	60.07
PGSC0003DMT400048241	Potato	extracellular	61.29	60.0
TraesCS7A01G426100.1	Wheat	vacuole	62.01	59.86
PGSC0003DMT400011902	Potato	extracellular	59.86	59.86
TraesCS7A01G426900.1	Wheat	extracellular	61.29	59.79
TraesCS7A01G427000.1	Wheat	extracellular	61.29	59.79
HORVU0Hr1G022110.1	Barley	extracellular, vacuole	62.37	59.59
EER90303	Sorghum	extracellular, golgi, vacuole	64.16	59.47
TraesCS7B01G327000.1	Wheat	extracellular	62.01	59.25
TraesCS7B01G326900.1	Wheat	extracellular	61.29	59.17
TraesCS7A01G426600.1	Wheat	vacuole	61.29	58.97
HORVU7Hr1G098260.1	Barley	vacuole	61.65	58.9
TraesCS7A01G426700.1	Wheat	extracellular	60.93	58.82
PGSC0003DMT400020314	Potato	cytosol, nucleus, peroxisome	57.71	58.76
CDY02738	Canola	extracellular, nucleus, vacuole	45.16	58.6
Zm00001d014617_P001	Maize	extracellular	62.37	58.39
PGSC0003DMT400005949	Potato	cytosol	40.14	57.73
Bra002723.1-P	Field mustard	extracellular	58.78	57.34
CDY67779	Canola	extracellular	58.78	57.34
AT5G57530.1	Thale cress	extracellular	58.42	57.19
AT5G57540.1	Thale cress	extracellular	58.06	57.04
Os06t0696400-01	Rice	extracellular	59.5	56.66
CDY11863	Canola	extracellular	58.06	56.64
PGSC0003DMT400020122	Potato	extracellular	58.78	56.55
TraesCS7D01G419900.1	Wheat	extracellular	58.06	56.45
AT4G25820.1	Thale cress	extracellular	58.06	56.45
PGSC0003DMT400079856	Potato	extracellular	58.06	56.45
CDX88627	Canola	extracellular	57.71	56.29
HORVU7Hr1G098440.2	Barley	extracellular	57.71	56.29
TraesCS7A01G427600.1	Wheat	extracellular	58.06	56.06
CDY69806	Canola	extracellular	56.99	55.99
Bra013923.1-P	Field mustard	extracellular	56.99	55.99
CDY67488	Canola	extracellular	56.63	55.83
TraesCS7B01G327700.1	Wheat	extracellular	57.71	55.52
EER88885	Sorghum	extracellular	58.06	55.48
Bra020436.1-P	Field mustard	extracellular	56.27	55.48
PGSC0003DMT400044562	Potato	extracellular	56.99	55.4
Bra019141.1-P	Field mustard	extracellular	56.63	55.24
CDY50186	Canola	extracellular	56.63	55.24
CDX92733	Canola	extracellular	55.91	54.55
PGSC0003DMT400044559	Potato	extracellular	56.63	54.48
TraesCS7D01G418600.1	Wheat	vacuole	62.01	54.23
Zm00001d014613_P001	Maize	plasma membrane	55.2	53.1
Zm00001d009309_P001	Maize	extracellular, vacuole	52.69	53.07
Bra006814.1-P	Field mustard	extracellular	56.99	49.84
PGSC0003DMT400005591	Potato	extracellular	50.54	47.64
PGSC0003DMT400028324	Potato	vacuole	49.82	47.12
PGSC0003DMT400026398	Potato	extracellular	46.95	46.29
PGSC0003DMT400063689	Potato	vacuole	49.1	46.28
PGSC0003DMT400013128	Potato	extracellular	26.52	46.25
PGSC0003DMT400048240	Potato	golgi	56.27	45.91
PGSC0003DMT400055138	Potato	extracellular	46.24	43.73
PGSC0003DMT400067358	Potato	extracellular	46.24	43.58
HORVU7Hr1G098280.1	Barley	extracellular, mitochondrion, vacuole	62.01	43.25
PGSC0003DMT400061841	Potato	extracellular	42.65	40.34
PGSC0003DMT400005342	Potato	extracellular	41.94	39.26

Protein Annotations

EntrezGene:102582057	Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798
GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757	UniProt:M1BM49
PFAM:PF00722	PFAM:PF06955	EnsemblPlantsGene:PGSC0003DMG400018741	PGSC:PGSC0003DMG400018741	EnsemblPlants:PGSC0003DMT400048242	PIRSF:PIRSF005604
ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF99	SUPFAM:SSF49899	SignalP:SignalP-noTM
UniParc:UPI000295CB4D	InterPro:XET_C	RefSeq:XP_006366192.1	InterPro:XTH	SEG:seg	:

Description

Xyloglucan endotransglucosylase/hydrolase 8 [Source:PGSC_GENE;Acc:PGSC0003DMG400018741]

Coordinates

chr7:+:2612886..2614450

Molecular Weight (calculated)

31979.6 Da

IEP (calculated)

4.658

GRAVY (calculated)

-0.386

Length

279 amino acids

Sequence
(BLAST)

001: MPSLFSFNIR LILIPVFISC MVVEYCASND LNQDFDITWG NERGEILNNG EILTLTLDNI SGSGFESKKE YLFGKIDMQI KLVQGNSAGT VTAYYLSSKG
101: SNHDEIDFEF LGNVSGEPYT LHTNVYTQGK GEREQQFHLW FDPTNDFHIY SILWNPQTIV FSVDNVPIRE FKNMENIGVA FPKSQSMKLY SSLWNADEWA
201: TMGGLIKTDW AQAPFTASYR NFNANICNNN NNSCKFLVEN LDPVNEEKLR RVQQKYMIYN YCTDNKRFPQ GFPPECSAT

Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)

001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V

Arabidopsis Description

XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.