Factsheet for Bra020436.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67488	Canola	extracellular	99.65	99.65
Bra002723.1-P	Field mustard	extracellular	93.64	92.66
AT5G57540.1	Thale cress	extracellular	90.81	90.49
AT5G57530.1	Thale cress	extracellular	90.46	89.82
CDY02738	Canola	extracellular, nucleus, vacuole	67.84	89.3
Bra006814.1-P	Field mustard	extracellular	92.58	82.13
Bra013923.1-P	Field mustard	extracellular	79.15	78.87
Bra019141.1-P	Field mustard	extracellular	79.15	78.32
GSMUA_Achr10P...	Banana	cytosol	50.18	71.36
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	46.29	67.88
GSMUA_Achr3P05220_001	Banana	cytosol	48.41	65.87
GSMUA_Achr5P21880_001	Banana	cytosol	48.76	64.79
GSMUA_Achr9P13820_001	Banana	cytosol	47.7	64.59
GSMUA_Achr7P16430_001	Banana	cytosol	48.06	63.85
TraesCS7D01G418700.1	Wheat	cytosol, mitochondrion, nucleus	48.06	60.99
HORVU7Hr1G098320.3	Barley	vacuole	61.84	60.55
TraesCS7A01G427000.1	Wheat	extracellular	60.78	60.14
Os06t0697000-02	Rice	extracellular	61.48	60.0
Bra020434.1-P	Field mustard	extracellular	60.42	60.0
TraesCS7D01G419300.1	Wheat	extracellular	61.48	60.0
HORVU0Hr1G022110.1	Barley	extracellular, vacuole	61.84	59.93
TraesCS7B01G327000.1	Wheat	extracellular	61.84	59.93
TraesCS7A01G426100.1	Wheat	vacuole	61.13	59.86
TraesCS7B01G327200.1	Wheat	extracellular	60.42	59.79
TraesCS7D01G419200.1	Wheat	extracellular	60.42	59.79
TraesCS7A01G426900.1	Wheat	extracellular	60.42	59.79
HORVU7Hr1G098260.1	Barley	vacuole	61.48	59.59
Bra013922.1-P	Field mustard	extracellular	60.42	59.58
Bra008806.1-P	Field mustard	extracellular	60.42	59.58
TraesCS7B01G326900.1	Wheat	extracellular	60.78	59.52
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	41.34	59.39
TraesCS7D01G419100.1	Wheat	extracellular	60.42	59.38
TraesCS7A01G426600.1	Wheat	vacuole	60.78	59.31
Bra002719.1-P	Field mustard	extracellular	59.01	59.01
TraesCS7A01G426700.1	Wheat	extracellular	60.07	58.82
Bra020433.1-P	Field mustard	extracellular	53.71	58.46
Bra002722.1-P	Field mustard	extracellular	57.95	57.75
Bra038442.1-P	Field mustard	extracellular	58.3	57.09
EER90303	Sorghum	extracellular, golgi, vacuole	60.42	56.81
Bra011179.1-P	Field mustard	extracellular	56.18	56.38
Zm00001d014617_P001	Maize	extracellular	59.36	56.38
Bra014975.1-P	Field mustard	extracellular, vacuole	57.95	56.36
Bra024089.1-P	Field mustard	extracellular	55.48	56.27
PGSC0003DMT400048242	Potato	extracellular	55.48	56.27
TraesCS7D01G419900.1	Wheat	extracellular	56.89	56.1
EER88885	Sorghum	extracellular	57.6	55.82
Os06t0696400-01	Rice	extracellular	57.6	55.63
HORVU7Hr1G098440.2	Barley	extracellular	56.18	55.59
TraesCS7B01G327700.1	Wheat	extracellular	56.89	55.52
TraesCS7A01G427600.1	Wheat	extracellular	56.54	55.36
Solyc07g006870.2.1	Tomato	extracellular, vacuole	55.12	55.32
Bra020432.1-P	Field mustard	extracellular	54.77	54.77
Zm00001d014613_P001	Maize	plasma membrane	55.48	54.14
TraesCS7D01G418600.1	Wheat	vacuole	60.78	53.92
Zm00001d009309_P001	Maize	extracellular, vacuole	52.65	53.79
Bra038819.1-P	Field mustard	cytosol, extracellular, nucleus	44.17	52.3
Bra008796.1-P	Field mustard	cytosol, extracellular, nucleus	48.41	49.1
Bra013164.1-P	Field mustard	extracellular	49.12	47.12
Bra006220.1-P	Field mustard	vacuole	48.41	46.76
Bra011066.1-P	Field mustard	extracellular	46.29	44.86
Bra017855.1-P	Field mustard	extracellular, vacuole	46.29	44.86
Bra024415.1-P	Field mustard	extracellular	44.88	44.56
Bra040716.1-P	Field mustard	vacuole	45.94	43.77
HORVU7Hr1G098280.1	Barley	extracellular, mitochondrion, vacuole	61.48	43.5
Bra000840.1-P	Field mustard	extracellular	43.82	42.76
Bra019846.1-P	Field mustard	extracellular	44.17	41.81
Bra034193.1-P	Field mustard	cytosol	42.05	34.59

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:Beta_glucanase	EnsemblPlantsGene:Bra020436	EnsemblPlants:Bra020436.1	EnsemblPlants:Bra020436.1-P
InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740
GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046
GO:GO:0071555	InterPro:IPR000757	UniProt:M4DV92	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604
PRINTS:PR00737	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF20	SUPFAM:SSF49899
SignalP:SignalP-noTM	UniParc:UPI0002545EEB	InterPro:XET_C	InterPro:XTH	SEG:seg	:

Description

AT5G57530 (E=3e-153) | xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative

Coordinates

chrA02:+:6745673..6746816

Molecular Weight (calculated)

32241.1 Da

IEP (calculated)

4.903

GRAVY (calculated)

-0.222

Length

283 amino acids

Sequence
(BLAST)

001: MAGFETKLML TLSLLLLIGV CTGSFYDNFD ITWGDGRANI FESGQLLSCT LDKISGSGFQ SKKEYLFGKI DMKMKLVAGN SAGTVTAYYL SSKGETWDEI
101: DFEFLGNVTG QPYVLHTNVF TGGKGNREMQ FYLWFDPTAD FHTYTVLWNP LNIIFLVDGI PIRVFKNNEA HGVAYPKSQP MKIYSSLWEA DDWATQGGRV
201: KTDWSNAPFS AYYRSFSDVD CCSRTSIWNW VTCNANSNSW MWTTLNSNQM GQMKWVQDEY LIYNYCTDYK RFPLGLPTEC NLA

Best Arabidopsis Sequence Match ( AT5G57530.1 )
(BLAST)

001: MAAFATKQSP LLLASLLILI GVATGSFYDS FDITWGAGRA NIFESGQLLT CTLDKTSGSG FQSKKEYLFG KIDMKIKLVP GNSAGTVTAY YLSSKGETWD
101: EIDFEFLGNV TGQPYVIHTN VFTGGKGNRE MQFYLWFDPT ADFHTYTVLW NPLNIIFLVD GIPIRVFKNN EANGVAYPKS QPMKIYSSLW EADDWATQGG
201: KVKTDWTNAP FSASYRSFND VDCCSRTSIW NWVTCNANSN SWMWTTLNSN QLGQLKWVQK DYMIYNYCTD FKRFPQGLPT ECNLN

Arabidopsis Description

XTH12Probable xyloglucan endotransglucosylase/hydrolase protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKL9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.