Factsheet for TraesCS7D01G419300.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G427000.1	Wheat	extracellular	95.86	97.2
TraesCS7D01G419100.1	Wheat	extracellular	95.17	95.83
TraesCS7D01G419200.1	Wheat	extracellular	94.48	95.8
TraesCS7D01G418700.1	Wheat	cytosol, mitochondrion, nucleus	72.41	94.17
HORVU7Hr1G098260.1	Barley	vacuole	93.1	92.47
Os06t0697000-02	Rice	extracellular	86.55	86.55
TraesCS7D01G418600.1	Wheat	vacuole	94.83	86.21
Zm00001d014617_P001	Maize	extracellular	83.1	80.87
EER90303	Sorghum	extracellular, golgi, vacuole	83.79	80.73
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	53.1	79.79
GSMUA_Achr3P05220_001	Banana	cytosol	55.86	77.88
GSMUA_Achr10P...	Banana	cytosol	52.41	76.38
GSMUA_Achr7P16430_001	Banana	cytosol	55.52	75.59
GSMUA_Achr9P13820_001	Banana	cytosol	53.45	74.16
GSMUA_Achr5P21880_001	Banana	cytosol	54.14	73.71
AT5G57550.1	Thale cress	extracellular	67.24	68.66
TraesCS7D01G419900.1	Wheat	extracellular	67.93	68.64
Bra020434.1-P	Field mustard	extracellular	66.21	67.37
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	45.17	66.5
Bra002722.1-P	Field mustard	extracellular	64.48	65.85
CDY67778	Canola	extracellular	64.48	65.85
CDY25904	Canola	extracellular	64.14	65.49
VIT_11s0052g01230.t01	Wine grape	cytosol	62.07	64.75
Solyc07g006870.2.1	Tomato	extracellular, vacuole	61.03	62.77
PGSC0003DMT400048242	Potato	extracellular	60.34	62.72
CDY67779	Canola	extracellular	61.38	62.24
Bra002723.1-P	Field mustard	extracellular	61.38	62.24
CDY11863	Canola	extracellular	61.03	61.89
CDY67488	Canola	extracellular	60.34	61.84
AT5G57540.1	Thale cress	extracellular	60.34	61.62
Bra020436.1-P	Field mustard	extracellular	60.0	61.48
AT5G57530.1	Thale cress	extracellular	60.34	61.4
CDX88627	Canola	extracellular	60.34	61.19
CDY02738	Canola	extracellular, nucleus, vacuole	45.17	60.93
AT4G25820.1	Thale cress	extracellular	60.0	60.63
CDY69806	Canola	extracellular	59.31	60.56
Bra013923.1-P	Field mustard	extracellular	59.31	60.56
CDY50186	Canola	extracellular	58.62	59.44
Bra019141.1-P	Field mustard	extracellular	58.62	59.44
CDX92733	Canola	extracellular	58.28	59.09
TraesCS7D01G419400.1	Wheat	vacuole	58.28	58.88
Bra006814.1-P	Field mustard	extracellular	59.66	54.23
TraesCS2D01G045100.1	Wheat	cytosol	39.66	53.99
TraesCS2D01G431800.1	Wheat	endoplasmic reticulum, extracellular	50.0	51.79
Solyc07g006850.1.1	Tomato	golgi	59.31	50.29
PGSC0003DMT400048240	Potato	golgi	58.62	49.71
TraesCS2D01G432100.1	Wheat	vacuole	51.38	49.17
TraesCS4D01G142800.1	Wheat	extracellular	48.97	48.3
TraesCS6D01G318500.1	Wheat	extracellular	48.97	48.14
TraesCS2D01G498400.1	Wheat	extracellular	46.9	47.06
TraesCS2D01G498500.2	Wheat	vacuole	46.55	46.71
TraesCS2D01G498700.1	Wheat	extracellular, vacuole	46.21	46.37
TraesCS2D01G498600.1	Wheat	extracellular, vacuole	46.21	46.37
TraesCS7D01G419600.1	Wheat	extracellular, vacuole	48.28	46.05
TraesCS2D01G498800.1	Wheat	vacuole	45.86	46.02
TraesCS7D01G339400.1	Wheat	extracellular	45.86	46.02
TraesCS2D01G431600.1	Wheat	vacuole	47.24	45.97
TraesCS2D01G086800.1	Wheat	extracellular	44.83	45.94
TraesCS2D01G224300.1	Wheat	extracellular	47.93	45.72
TraesCS2D01G431700.1	Wheat	extracellular, vacuole	45.52	44.59
TraesCS2D01G431500.1	Wheat	extracellular	47.93	44.27

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411
GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046
InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034	PFscan:PS51257
PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF101	SUPFAM:SSF49899	SignalP:SignalP-noTM	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS7D01G419300	EnsemblPlants:TraesCS7D01G419300.1	InterPro:XET_C	InterPro:XTH	TIGR:cd02176	SEG:seg

Description

No Description!

Coordinates

chr7D:+:538662073..538663152

Molecular Weight (calculated)

32316.2 Da

IEP (calculated)

6.867

GRAVY (calculated)

-0.346

Length

290 amino acids

Sequence
(BLAST)

001: MARMAVLGLA ILLAASCALA AASFDKEFDI TWGDGRGKIL NNGQLLTLGL DKVSGSGFQS KHEYLFGKID MQLKLVPGNS AGTVTAYYLS SQGPTHDEID
101: FEFLGNVTGE PYTLHTNVFT QGQGQREQQF RLWFDPTNDF HTYSILWNPK HIIFMVDDMP IRDFRNLEGK GIAFPKNQPM RLYSSLWNAD DWATQGGRVK
201: TDWSHAPFSA SYRGFKADAC VVTAAGRPHC GASVGTDVAP GTGAAGEWYN QELDLTRQQR MRWVQRNYMI YNYCTDPKRV AQGVPAECSM

Best Arabidopsis Sequence Match ( AT5G57550.1 )
(BLAST)

001: MDRSTFILSL LFTLTVSTTT LFSPVFAGTF DTEFDITWGD GRGKVLNNGE LLTLSLDRAS GSGFQTKKEY LFGKIDMQLK LVPGNSAGTV TAYYLKSKGD
101: TWDEIDFEFL GNLTGDPYTM HTNVYTQGKG DREQQFHLWF DPTADFHTYS VLWNPHHIVF MVDDIPVREF KNLQHMGIQY PKLQPMRLYS SLWNADQWAT
201: RGGLVKTDWS KAPFTASYRN FRADACVSSG GRSSCPAGSP RWFSQRLDLT AEDKMRVVQR KYMIYNYCTD TKRFPQGFPK ECRH

Arabidopsis Description

XTH25Probable xyloglucan endotransglucosylase/hydrolase protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q38907]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.