Factsheet for TraesCS2D01G498500.2

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G498200.1	Wheat	extracellular	98.27	98.27
TraesCS2D01G498700.1	Wheat	extracellular, vacuole	98.27	98.27
TraesCS2D01G498600.1	Wheat	extracellular, vacuole	98.27	98.27
TraesCS2A01G498400.1	Wheat	vacuole	98.27	98.27
TraesCS2A01G498300.1	Wheat	vacuole	98.27	98.27
TraesCS2B01G526500.1	Wheat	vacuole	97.92	97.92
TraesCS2D01G498400.1	Wheat	extracellular	96.89	96.89
TraesCS2D01G498800.1	Wheat	vacuole	90.66	90.66
HORVU2Hr1G111060.1	Barley	vacuole	74.05	84.92
HORVU2Hr1G111030.2	Barley	vacuole	85.81	75.38
TraesCS7D01G339400.1	Wheat	extracellular	62.98	62.98
TraesCS2D01G086800.1	Wheat	extracellular	61.59	62.9
TraesCS7D01G418700.1	Wheat	cytosol, mitochondrion, nucleus	39.1	50.67
GSMUA_Achr8P19740_001	Banana	extracellular	47.06	50.56
GSMUA_Achr7P10940_001	Banana	extracellular	48.44	50.36
TraesCS2D01G045100.1	Wheat	cytosol	34.95	47.42
GSMUA_Achr3P03390_001	Banana	extracellular	48.1	47.28
VIT_11s0016g03480.t01	Wine grape	extracellular	47.06	46.74
TraesCS7D01G419300.1	Wheat	extracellular	46.71	46.55
TraesCS7D01G419100.1	Wheat	extracellular	45.67	45.83
KRH41530	Soybean	nucleus	44.64	45.58
AT4G28850.1	Thale cress	extracellular	46.02	45.55
TraesCS7D01G419200.1	Wheat	extracellular	44.98	45.45
KRH39331	Soybean	nucleus	44.98	44.98
TraesCS7D01G419400.1	Wheat	vacuole	44.64	44.95
KRH76320	Soybean	nucleus	44.64	44.64
Solyc12g007260.1.1	Tomato	extracellular	44.64	44.18
CDY06861	Canola	extracellular	44.64	44.18
Solyc12g007250.1.1	Tomato	extracellular	44.29	43.99
Bra011066.1-P	Field mustard	extracellular	44.29	43.84
TraesCS7D01G419900.1	Wheat	extracellular	43.25	43.55
CDY35228	Canola	extracellular	43.94	43.49
Solyc12g007270.1.1	Tomato	extracellular	43.94	43.34
TraesCS2D01G431800.1	Wheat	endoplasmic reticulum, extracellular	39.79	41.07
TraesCS2D01G431600.1	Wheat	vacuole	41.52	40.27
TraesCS2D01G431700.1	Wheat	extracellular, vacuole	41.18	40.2
TraesCS7D01G418600.1	Wheat	vacuole	44.29	40.13
TraesCS6D01G318500.1	Wheat	extracellular	40.83	40.0
TraesCS2D01G224300.1	Wheat	extracellular	41.87	39.8
TraesCS4D01G142800.1	Wheat	extracellular	40.48	39.8
TraesCS7D01G419600.1	Wheat	extracellular, vacuole	40.83	38.82
TraesCS2D01G432100.1	Wheat	vacuole	39.1	37.29
TraesCS2D01G431500.1	Wheat	extracellular	38.41	35.35

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411
GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046
InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034	PFscan:PS51762
PANTHER:PTHR31062	PANTHER:PTHR31062:SF49	SUPFAM:SSF49899	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2D01G498500
EnsemblPlants:TraesCS2D01G498500.2	InterPro:XET_C	InterPro:XTH	TIGR:cd02176	SEG:seg	:

Description

No Description!

Coordinates

chr2D:+:593857608..593858573

Molecular Weight (calculated)

32035.6 Da

IEP (calculated)

6.235

GRAVY (calculated)

-0.334

Length

289 amino acids

Sequence
(BLAST)

001: MESSRRALLL VAVAATAIGL AGASFRDNCD IKWNPENAAF SDDGHGLTMS LKSNSSGCLL QTKKQFIYGS VSTLIKLVPG NSAGTVTTYY TSSVGADHDE
101: IDFEFLGNET GQPYTLHTNV FADGVGKKEM QFVPWFDPTA DFHAYTISWT PCMIVWYVDD VPIRVFRNYR DKGIAYPIKR PMFGYSSIWS AEDWATQGGR
201: VKADWSKAPF VAGYRDMVLD VCPCDGADSC VYGCAGAFSH GGRQQNCAGL TDQQRAKMQE VQKTHRIYDY CVDYRDNKKP GSECSLPQY

Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)

001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V

Arabidopsis Description

XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.