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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH76320 Soybean nucleus 97.58 97.58
KRH41530 Soybean nucleus 76.82 78.45
VIT_11s0016g03480.t01 Wine grape extracellular 78.89 78.35
Solyc12g007260.1.1 Tomato extracellular 66.09 65.41
Solyc12g007250.1.1 Tomato extracellular 63.32 62.89
AT4G28850.1 Thale cress extracellular 62.28 61.64
CDY06861 Canola extracellular 59.86 59.25
GSMUA_Achr8P19740_001 Banana extracellular 55.02 59.11
Bra011066.1-P Field mustard extracellular 58.82 58.22
CDY35228 Canola extracellular 58.48 57.88
GSMUA_Achr3P03390_001 Banana extracellular 58.82 57.82
GSMUA_Achr7P10940_001 Banana extracellular 54.33 56.47
KRH19136 Soybean nucleus 52.94 54.06
KRH19006 Soybean vacuole 54.33 53.58
KRH19002 Soybean extracellular 52.6 53.33
KRH02889 Soybean extracellular 53.29 52.92
KRH19003 Soybean extracellular 51.9 52.26
KRH19005 Soybean vacuole 51.21 51.93
KRH37378 Soybean nucleus 47.75 51.88
KRH31558 Soybean nucleus 49.48 51.81
KRH02894 Soybean endoplasmic reticulum, extracellular 52.25 51.71
KRH02890 Soybean extracellular 50.87 51.58
KRH02893 Soybean extracellular 50.87 51.58
KRH59064 Soybean extracellular 52.6 51.35
KRH42944 Soybean extracellular 51.9 51.02
KRH02892 Soybean extracellular 50.17 50.52
KRH02895 Soybean cytosol 51.21 50.51
KRG97361 Soybean nucleus 48.44 50.18
TraesCS7A01G331200.1 Wheat vacuole 47.75 48.42
EER89799 Sorghum vacuole 49.13 48.3
KRH42721 Soybean extracellular, nucleus 47.06 48.06
KRH58823 Soybean extracellular, nucleus 47.06 48.06
TraesCS7B01G242900.1 Wheat extracellular, vacuole 47.75 47.75
TraesCS7D01G339400.1 Wheat extracellular 47.4 47.4
EES04929 Sorghum extracellular, vacuole 47.4 47.24
KRH58172 Soybean extracellular, vacuole 46.71 46.39
Zm00001d053320_P001 Maize vacuole 46.71 46.39
TraesCS2D01G498400.1 Wheat extracellular 46.37 46.37
KRH77174 Soybean extracellular 47.06 45.95
KRH04364 Soybean extracellular 46.37 45.89
TraesCS2A01G498200.1 Wheat extracellular 45.67 45.67
KRH28311 Soybean extracellular, vacuole 46.71 45.45
Zm00001d046007_P001 Maize extracellular 46.37 45.42
TraesCS2B01G526500.1 Wheat vacuole 45.33 45.33
TraesCS2D01G498600.1 Wheat extracellular, vacuole 45.33 45.33
TraesCS2D01G498700.1 Wheat extracellular, vacuole 45.33 45.33
KRH73676 Soybean extracellular 44.29 45.23
TraesCS2D01G498800.1 Wheat vacuole 44.98 44.98
TraesCS2D01G498500.2 Wheat vacuole 44.98 44.98
TraesCS2A01G498300.1 Wheat vacuole 44.98 44.98
TraesCS2A01G498400.1 Wheat vacuole 44.98 44.98
HORVU2Hr1G111060.1 Barley vacuole 39.1 44.84
OQU75596 Sorghum cytosol, extracellular, plastid 24.91 44.44
TraesCS2B01G526600.1 Wheat extracellular 44.64 44.18
KRG98913 Soybean vacuole 43.94 44.1
TraesCS2A01G498500.1 Wheat vacuole 44.29 43.84
KRH22496 Soybean extracellular 43.94 43.79
KRH14468 Soybean extracellular 43.6 43.75
EES04926 Sorghum extracellular, vacuole 44.64 43.73
KRH06776 Soybean endoplasmic reticulum 43.94 43.05
KRH12375 Soybean extracellular 47.06 43.04
KRH26853 Soybean vacuole 43.94 42.91
KRH35625 Soybean vacuole 43.94 42.91
KRG94750 Soybean endoplasmic reticulum 43.6 42.71
KRG91154 Soybean extracellular 43.6 42.57
HORVU7Hr1G081740.1 Barley extracellular, vacuole 47.75 42.46
TraesCS2A01G089000.1 Wheat extracellular 41.52 42.25
Zm00001d015977_P001 Maize mitochondrion 43.94 42.19
TraesCS2B01G104700.1 Wheat extracellular 41.52 42.11
KRH70105 Soybean nucleus 44.98 42.07
TraesCS2D01G086800.1 Wheat extracellular 41.18 42.05
KRH25426 Soybean extracellular 42.91 41.61
KRH56088 Soybean vacuole 42.21 41.08
HORVU2Hr1G014530.3 Barley extracellular 42.21 39.1
KRG94748 Soybean extracellular, vacuole 34.6 38.61
KRG91233 Soybean extracellular 40.14 38.54
KRH35587 Soybean extracellular 39.79 38.08
KRH06775 Soybean endoplasmic reticulum 44.29 37.1
HORVU2Hr1G111030.2 Barley vacuole 41.18 36.17
Protein Annotations
EntrezGene:100805352Gene3D:2.60.120.200MapMan:50.2.4EMBL:ACUP02005930InterPro:ConA-like_dom_sfInterPro:GH16
InterPro:GH16_ASEnsemblPlantsGene:GLYMA_09G193500GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005575
GO:GO:0005576GO:GO:0005618GO:GO:0005623GO:GO:0005975GO:GO:0006073GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0010411GO:GO:0016043GO:GO:0016740GO:GO:0016762
GO:GO:0016787GO:GO:0016798GO:GO:0030312GO:GO:0042546GO:GO:0048046GO:GO:0071555
UniProt:I1L4L2InterPro:IPR000757EnsemblPlants:KRH39331ProteinID:KRH39331ProteinID:KRH39331.1PFAM:PF00722
PFAM:PF06955PIRSF:PIRSF005604ScanProsite:PS01034PFscan:PS51762PANTHER:PTHR31062PANTHER:PTHR31062:SF55
SUPFAM:SSF49899SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI000233900FInterPro:XET_CInterPro:XTH
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr9:+:41815173..41817324
Molecular Weight (calculated)
33186.2 Da
IEP (calculated)
8.275
GRAVY (calculated)
-0.308
Length
289 amino acids
Sequence
(BLAST)
001: MAQIEKLLVA LFLFAVAQSI ILVDATFSKS MYITWGSQHA SMQGEDLQLV LDQTSGSAAQ TKKAFLFGSI ESRIKLVPGN SAGTVTAYYL SSTGSQHDEI
101: DFEFLGNISG QPYIVHTNIY TQGNGSREQQ FYLWFDPTSD FHNYTIHWNP IEVVWYIDSI PIRVYRNYEN EGIAYPNKQG MRVYTSLWNA DDWATRGGLV
201: KTNWSGAPFI ARFNHFRARA CKWNGAVSIN QCALNFPANW WTSPTYKQLS YAKLGQMNWV RNNYMIYDYC RDTKRFNGMM PPECFKSQF
Best Arabidopsis Sequence Match ( AT4G28850.1 )
(BLAST)
001: MAGLQAKTLM FVLAAALATL GRTFVEADFS KNFIVTWGKD HMFMNGTNLR LVLDKSAGSA IKSKVAHLFG SVEMLIKLVP GNSAGTVAAY YLSSTGSTHD
101: EIDFEFLGNA TGQPYTIHTN LYAQGKGNRE QQFRPWFNPT NGFHNYTIHW NPSEVVWFVD GTPIRVFRNY ESEGIAYPNK QGMKVFASLW NAEDWATQGG
201: RVKTNWTLAP FVAEGRRYKA RACLWKGSVS IKQCVDPTIR SNWWTSPSFS QLTASQLTKM QKIRDGFMIY DYCKDTNRFK GVMPPECSKK QF
Arabidopsis Description
XTH26Probable xyloglucan endotransglucosylase/hydrolase protein 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVV2]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.