CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25426	Soybean	extracellular	95.29	94.97
KRH22496	Soybean	extracellular	83.84	85.86
KRH26853	Soybean	vacuole	82.83	83.11
VIT_12s0134g00160.t01	Wine grape	extracellular	77.44	77.7
Solyc07g052980.2.1	Tomato	extracellular	73.74	73.99
PGSC0003DMT400067358	Potato	extracellular	72.73	72.97
Bra000840.1-P	Field mustard	extracellular	66.67	68.28
AT4G03210.1	Thale cress	extracellular	66.67	68.28
CDY53771	Canola	extracellular	66.67	68.28
CDY22110	Canola	extracellular	66.67	68.28
CDY21985	Canola	extracellular	66.33	67.93
CDX90896	Canola	extracellular	65.99	67.59
GSMUA_Achr9P29980_001	Banana	extracellular, vacuole	59.6	66.29
GSMUA_Achr6P19100_001	Banana	extracellular, vacuole	58.59	64.44
Bra034193.1-P	Field mustard	cytosol	64.98	56.1
EER91282	Sorghum	extracellular, vacuole	55.89	51.55
EES11493	Sorghum	extracellular, vacuole	55.89	51.08
KRH37378	Soybean	nucleus	44.78	50.0
Zm00001d002193_P003	Maize	extracellular, vacuole	55.89	49.26
KRH58172	Soybean	extracellular, vacuole	48.15	49.14
KRH19136	Soybean	nucleus	46.8	49.12
KRH04364	Soybean	extracellular	48.15	48.97
KRH31558	Soybean	nucleus	45.45	48.91
KRH19003	Soybean	extracellular	47.14	48.78
KRG97361	Soybean	nucleus	45.79	48.75
KRH06776	Soybean	endoplasmic reticulum	48.15	48.47
KRH02892	Soybean	extracellular	46.8	48.43
KRH02893	Soybean	extracellular	46.46	48.42
KRH02890	Soybean	extracellular	46.46	48.42
KRH19005	Soybean	vacuole	46.46	48.42
KRH58823	Soybean	extracellular, nucleus	46.13	48.41
KRH42721	Soybean	extracellular, nucleus	46.13	48.41
KRG94750	Soybean	endoplasmic reticulum	47.81	48.14
KRH77174	Soybean	extracellular	47.14	47.3
KRH02894	Soybean	endoplasmic reticulum, extracellular	46.46	47.26
KRH19002	Soybean	extracellular	45.12	47.02
KRH28311	Soybean	extracellular, vacuole	46.8	46.8
KRH19006	Soybean	vacuole	45.79	46.42
KRG94748	Soybean	extracellular, vacuole	39.73	45.56
KRH02889	Soybean	extracellular	44.44	45.36
KRH70105	Soybean	nucleus	47.14	45.31
KRH02895	Soybean	cytosol	44.11	44.71
KRH41530	Soybean	nucleus	41.75	43.82
KRH59064	Soybean	extracellular	43.1	43.24
KRH42944	Soybean	extracellular	42.42	42.86
KRH35625	Soybean	vacuole	42.42	42.57
KRH76320	Soybean	nucleus	41.41	42.56
KRG91233	Soybean	extracellular	43.1	42.52
KRH12375	Soybean	extracellular	45.12	42.41
KRH35587	Soybean	extracellular	43.1	42.38
KRG91154	Soybean	extracellular	42.09	42.23
KRH39331	Soybean	nucleus	41.08	42.21
KRH06775	Soybean	endoplasmic reticulum	48.82	42.03
KRH73676	Soybean	extracellular	39.39	41.34
KRH14468	Soybean	extracellular	39.73	40.97
KRG98913	Soybean	vacuole	39.39	40.62

Protein Annotations

EntrezGene:100786906	Gene3D:2.60.120.200	MapMan:50.2.4	EMBL:ACUP02004094	EMBL:BT093449	InterPro:Beta_glucanase
UniProt:C6T7L6	InterPro:ConA-like_dom_sf	InterPro:GH16	EnsemblPlantsGene:GLYMA_06G302300	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975
GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798
GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757	EnsemblPlants:KRH56088
ProteinID:KRH56088	ProteinID:KRH56088.1	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	PRINTS:PR00737
PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF11	SUPFAM:SSF49899	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0001B15B73	InterPro:XET_C	InterPro:XTH	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:49159490..49162112

Molecular Weight (calculated)

34149.2 Da

IEP (calculated)

6.839

GRAVY (calculated)

-0.382

Length

297 amino acids

Sequence
(BLAST)

001: MSRFFGFFFV GLTLMLVGVA NAMANSSNKF DQLFQPSWAF DHFIHERDLL KLKLDKFSGA GFTSKSKYMF GKVTIQLKLV EGDSAGTVTA FYMSSDGPSH
101: NEFDFEFLGN ITGEPYSVQT NVYVNGVGNR EQRLNLWFDP TKDFHSYSIF WNQRQVVFLV DETPIRVHTN MEHKGIPFPK DQPMGVYSSI WNADDWATQG
201: GRVKTDWSHA PFIATYKNFE INACECPVSV AAMDNAKKCT SSEGKKYWWD EPNLAELNLH QSHQLMWVRA RHIFYDYCTD TARFPVSPAE CVHHRHN

Best Arabidopsis Sequence Match ( AT4G03210.1 )
(BLAST)

001: MVGMDLFKCV MMIMVLVVSC GEAVSGAKFD ELYRSSWAMD HCVNEGEVTK LKLDNYSGAG FESRSKYLFG KVSIQIKLVE GDSAGTVTAF YMSSDGPNHN
101: EFDFEFLGNT TGEPYIVQTN IYVNGVGNRE QRLNLWFDPT TEFHTYSILW SKRSVVFMVD ETPIRVQKNL EEKGIPFAKD QAMGVYSSIW NADDWATQGG
201: LVKTDWSHAP FVASYKEFQI DACEIPTTTD LSKCNGDQKF WWDEPTVSEL SLHQNHQLIW VRANHMIYDY CFDATRFPVT PLECQHHRHL

Arabidopsis Description

XTH9Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178V222]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.