CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 7
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35587	Soybean	extracellular	97.67	97.35
VIT_10s0116g00520.t01	Wine grape	extracellular, vacuole	81.4	81.67
Solyc03g031800.2.1	Tomato	extracellular	77.74	79.32
PGSC0003DMT400061841	Potato	extracellular	77.41	78.98
Bra019846.1-P	Field mustard	extracellular	78.07	78.6
CDX97967	Canola	extracellular	78.07	78.6
CDY49788	Canola	extracellular	78.07	78.6
AT1G11545.1	Thale cress	extracellular	78.07	77.05
Solyc10g005350.2.1	Tomato	extracellular	73.42	76.74
GSMUA_Achr1P08500_001	Banana	extracellular	64.78	71.96
PGSC0003DMT400005342	Potato	extracellular	66.11	66.78
Solyc02g080160.2.1	Tomato	extracellular	65.78	66.44
TraesCS2D01G224300.1	Wheat	extracellular	64.12	63.49
TraesCS2B01G244500.1	Wheat	extracellular	64.45	63.4
KXG36371	Sorghum	extracellular	62.13	58.62
Zm00001d021667_P001	Maize	plasma membrane	63.46	57.88
HORVU2Hr1G045330.4	Barley	extracellular, vacuole	63.79	51.75
KRH37378	Soybean	nucleus	41.86	47.37
KRH06776	Soybean	endoplasmic reticulum	46.18	47.12
KRG94750	Soybean	endoplasmic reticulum	45.51	46.44
KRH22496	Soybean	extracellular	44.52	46.21
KRH58172	Soybean	extracellular, vacuole	44.52	46.05
KRH19003	Soybean	extracellular	43.52	45.64
KRH02890	Soybean	extracellular	43.19	45.61
KRH02893	Soybean	extracellular	43.19	45.61
KRH19002	Soybean	extracellular	43.19	45.61
KRH19005	Soybean	vacuole	43.19	45.61
KRH26853	Soybean	vacuole	44.85	45.61
KRH04364	Soybean	extracellular	44.19	45.55
KRH70105	Soybean	nucleus	46.51	45.31
KRH19136	Soybean	nucleus	42.19	44.88
KRH02894	Soybean	endoplasmic reticulum, extracellular	43.52	44.86
KRH02892	Soybean	extracellular	42.52	44.6
KRH77174	Soybean	extracellular	43.85	44.59
KRH28311	Soybean	extracellular, vacuole	43.85	44.44
KRH31558	Soybean	nucleus	40.53	44.2
KRH02895	Soybean	cytosol	42.52	43.69
KRH25426	Soybean	extracellular	43.19	43.62
KRG97361	Soybean	nucleus	40.2	43.37
KRH19006	Soybean	vacuole	42.19	43.34
KRH02889	Soybean	extracellular	41.86	43.3
KRH58823	Soybean	extracellular, nucleus	40.53	43.11
KRH42721	Soybean	extracellular, nucleus	40.53	43.11
KRH56088	Soybean	vacuole	42.52	43.1
KRH42944	Soybean	extracellular	41.86	42.86
KRG94748	Soybean	extracellular, vacuole	36.88	42.86
KRH59064	Soybean	extracellular	41.53	42.23
KRH35625	Soybean	vacuole	41.53	42.23
KRG91154	Soybean	extracellular	40.53	41.22
KRH41530	Soybean	nucleus	38.54	40.99
KRG98913	Soybean	vacuole	38.87	40.62
KRH39331	Soybean	nucleus	38.54	40.14
KRH06775	Soybean	endoplasmic reticulum	45.51	39.71
KRH12375	Soybean	extracellular	41.53	39.56
KRH76320	Soybean	nucleus	37.87	39.45
KRH14468	Soybean	extracellular	36.21	37.85
KRH73676	Soybean	extracellular	34.88	37.1

Protein Annotations

EntrezGene:100793766	Gene3D:2.60.120.200	MapMan:50.2.4	EMBL:ACUP02012669	InterPro:Beta_glucanase	InterPro:ConA-like_dom_sf
InterPro:GH16	InterPro:GH16_AS	EnsemblPlantsGene:GLYMA_20G141800	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740
GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046
GO:GO:0071555	UniProt:I1NGA4	InterPro:IPR000757	EnsemblPlants:KRG91233	ProteinID:KRG91233	ProteinID:KRG91233.1
PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	PRINTS:PR00737	ScanProsite:PS01034	PFscan:PS51762
PANTHER:PTHR31062	PANTHER:PTHR31062:SF1	SUPFAM:SSF49899	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000233DD5A
InterPro:XET_C	InterPro:XTH	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:38041040..38043538

Molecular Weight (calculated)

34884.2 Da

IEP (calculated)

4.496

GRAVY (calculated)

-0.587

Length

301 amino acids

Sequence
(BLAST)

001: MDARASSSSA SSILFLAAIV AAYFYSSEAA VSKGSFEDNF SIMWSEDHFT TSKDGQIWYL SLDKDTGCGF QTKQRYRFGW FSMKLKLVAG DSAGVVTAYY
101: MCSENGAGPE RDELDFEFLG NRTGEPYLIQ TNVYKNGTGG REMRHMLWFD PTEDYHTYSI LWNNHQIVFF VDRVPVRVFK NNGEPNNFFP NEKPMYLFSS
201: IWNADDWATR GGLEKTNWKL APFVSSYKDF SVDGCQWEDP YPACVSTTTK NWWDQYDAWH LSDDQKKDYA WVQRNLVIYD YCQDSERYPT TPEECSLSPW
301: D

Best Arabidopsis Sequence Match ( AT1G11545.1 )
(BLAST)

001: METERRIITS CSAMTALFLF MTALMASSSI AATPTQSFED NFNIMWSENH FTTSDDGEIW NLSLDNDTGC GFQTKHMYRF GWFSMKLKLV GGDSAGVVTA
101: YYMCSENGAG PERDEIDFEF LGNRTGQPYI IQTNVYKNGT GNREMRHSLW FDPTKDYHTY SILWNNHQLV FFVDRVPIRV YKNSDKVPNN DFFPNQKPMY
201: LFSSIWNADD WATRGGLEKT DWKKAPFVSS YKDFAVEGCR WKDPFPACVS TTTENWWDQY DAWHLSKTQK MDYAWVQRNL VVYDYCKDSE RFPTLPWECS
301: ISPWA

Arabidopsis Description

XTH8Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178W0W2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.