Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G224300.1 | Wheat | extracellular | 97.39 | 98.03 |
| HORVU2Hr1G045330.4 | Barley | extracellular, vacuole | 94.77 | 78.17 |
| KXG36371 | Sorghum | extracellular | 79.08 | 75.86 |
| Zm00001d021667_P001 | Maize | plasma membrane | 80.07 | 74.24 |
| GSMUA_Achr1P08500_001 | Banana | extracellular | 62.09 | 70.11 |
| VIT_10s0116g00520.t01 | Wine grape | extracellular, vacuole | 63.4 | 64.67 |
| KRG91233 | Soybean | extracellular | 63.4 | 64.45 |
| KRH35587 | Soybean | extracellular | 62.75 | 63.58 |
| Bra019846.1-P | Field mustard | extracellular | 62.09 | 63.55 |
| CDX97967 | Canola | extracellular | 62.09 | 63.55 |
| CDY49788 | Canola | extracellular | 62.09 | 63.55 |
| Solyc10g005350.2.1 | Tomato | extracellular | 59.8 | 63.54 |
| PGSC0003DMT400061841 | Potato | extracellular | 61.11 | 63.39 |
| Solyc03g031800.2.1 | Tomato | extracellular | 61.11 | 63.39 |
| AT1G11545.1 | Thale cress | extracellular | 62.42 | 62.62 |
| PGSC0003DMT400005342 | Potato | extracellular | 55.23 | 56.71 |
| Solyc02g080160.2.1 | Tomato | extracellular | 55.23 | 56.71 |
| TraesCS7B01G327200.1 | Wheat | extracellular | 43.79 | 46.85 |
| TraesCS7B01G326900.1 | Wheat | extracellular | 44.12 | 46.71 |
| TraesCS7B01G327000.1 | Wheat | extracellular | 44.12 | 46.23 |
| TraesCS7B01G242900.1 | Wheat | extracellular, vacuole | 40.85 | 43.25 |
| TraesCS7B01G327700.1 | Wheat | extracellular | 40.52 | 42.76 |
| TraesCS7B01G327400.1 | Wheat | extracellular | 39.54 | 42.46 |
| TraesCS2B01G526500.1 | Wheat | vacuole | 39.87 | 42.21 |
| TraesCS2B01G059000.1 | Wheat | vacuole | 39.54 | 41.58 |
| TraesCS2B01G526600.1 | Wheat | extracellular | 39.22 | 41.1 |
| TraesCS7B01G364300.1 | Wheat | extracellular | 37.25 | 40.14 |
| TraesCS7B01G327500.1 | Wheat | extracellular, vacuole | 38.89 | 39.8 |
| TraesCS2B01G104700.1 | Wheat | extracellular | 36.93 | 39.65 |
| TraesCS2B01G455400.1 | Wheat | extracellular | 38.56 | 38.94 |
| TraesCS2B01G454600.1 | Wheat | vacuole | 37.58 | 38.59 |
| TraesCS2B01G454500.1 | Wheat | extracellular | 38.56 | 37.94 |
| TraesCS2B01G454800.1 | Wheat | extracellular | 34.31 | 37.5 |
| TraesCS6B01G368300.1 | Wheat | extracellular | 35.95 | 37.29 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | InterPro:Beta_glucanase | InterPro:ConA-like_dom_sf | InterPro:GH16 | InterPro:GH16_AS |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 |
| GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0010411 | GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 | GO:GO:0030312 | GO:GO:0042546 |
| GO:GO:0048046 | InterPro:IPR000757 | PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 | PRINTS:PR00737 |
| ScanProsite:PS01034 | PFscan:PS51257 | PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF1 | SUPFAM:SSF49899 |
| SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS2B01G244500 | EnsemblPlants:TraesCS2B01G244500.1 | InterPro:XET_C | InterPro:XTH | TIGR:cd02176 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:-:248458546..248460644
Molecular Weight (calculated)
34237.0 Da
IEP (calculated)
4.881
GRAVY (calculated)
-0.365
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRPCVGALL ACAAIAASCC CCFQLQFQGA DAAATPSFGD NFDITGAEDH VKTSPDGQTW YLSLDNKTGV GFQTKQKYLF GWFSMKLKLV GNDSAGVVTA
101: YYMCSDLDAA PERDELDFEF LGNRTGEPYI IQTNVYRSGV GGREMRHSLW FDPTAEFHSY SILWNPKQIV FFVDKVPIRE YRNSDKPNKF FPIMKPMYVF
201: SSIWNADDWA TRGGLEKTDW TKGPFVSSYS DFTADACAWA TGPAPPACAA ATGNSWWDQP PAWALDDGQR RDSGWVSRNL VIYDYCDDRK RFPTVPEECA
301: LRTKTS
101: YYMCSDLDAA PERDELDFEF LGNRTGEPYI IQTNVYRSGV GGREMRHSLW FDPTAEFHSY SILWNPKQIV FFVDKVPIRE YRNSDKPNKF FPIMKPMYVF
201: SSIWNADDWA TRGGLEKTDW TKGPFVSSYS DFTADACAWA TGPAPPACAA ATGNSWWDQP PAWALDDGQR RDSGWVSRNL VIYDYCDDRK RFPTVPEECA
301: LRTKTS
001: METERRIITS CSAMTALFLF MTALMASSSI AATPTQSFED NFNIMWSENH FTTSDDGEIW NLSLDNDTGC GFQTKHMYRF GWFSMKLKLV GGDSAGVVTA
101: YYMCSENGAG PERDEIDFEF LGNRTGQPYI IQTNVYKNGT GNREMRHSLW FDPTKDYHTY SILWNNHQLV FFVDRVPIRV YKNSDKVPNN DFFPNQKPMY
201: LFSSIWNADD WATRGGLEKT DWKKAPFVSS YKDFAVEGCR WKDPFPACVS TTTENWWDQY DAWHLSKTQK MDYAWVQRNL VVYDYCKDSE RFPTLPWECS
301: ISPWA
101: YYMCSENGAG PERDEIDFEF LGNRTGQPYI IQTNVYKNGT GNREMRHSLW FDPTKDYHTY SILWNNHQLV FFVDRVPIRV YKNSDKVPNN DFFPNQKPMY
201: LFSSIWNADD WATRGGLEKT DWKKAPFVSS YKDFAVEGCR WKDPFPACVS TTTENWWDQY DAWHLSKTQK MDYAWVQRNL VVYDYCKDSE RFPTLPWECS
301: ISPWA
Arabidopsis Description
XTH8Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178W0W2]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.