Factsheet for TraesCS2B01G454500.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G431500.1	Wheat	extracellular	95.82	94.9
TraesCS2A01G433500.1	Wheat	mitochondrion	96.78	89.85
HORVU2Hr1G101150.1	Barley	vacuole	73.31	63.51
Os04t0604900-01	Rice	extracellular, vacuole	61.74	59.81
TraesCS7B01G326900.1	Wheat	extracellular	44.37	47.75
TraesCS7B01G327700.1	Wheat	extracellular	44.37	47.59
TraesCS7B01G327200.1	Wheat	extracellular	43.41	47.2
TraesCS7B01G327400.1	Wheat	extracellular	43.09	47.02
TraesCS7B01G327000.1	Wheat	extracellular	44.05	46.92
TraesCS7B01G327500.1	Wheat	extracellular, vacuole	41.8	43.48
TraesCS6B01G368300.1	Wheat	extracellular	38.91	41.02
TraesCS2B01G454800.1	Wheat	extracellular	36.66	40.71
TraesCS7B01G242900.1	Wheat	extracellular, vacuole	37.62	40.48
TraesCS2B01G104700.1	Wheat	extracellular	36.98	40.35
TraesCS7B01G364300.1	Wheat	extracellular	35.69	39.08
TraesCS2B01G059000.1	Wheat	vacuole	36.33	38.83
TraesCS2B01G526500.1	Wheat	vacuole	36.01	38.75
TraesCS2B01G244500.1	Wheat	extracellular	37.94	38.56
TraesCS2B01G454600.1	Wheat	vacuole	36.01	37.58
TraesCS2B01G526600.1	Wheat	extracellular	34.73	36.99
TraesCS2B01G455400.1	Wheat	extracellular	35.69	36.63

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411
GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046
InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034	PFscan:PS51257
PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF53	SUPFAM:SSF49899	SignalP:SignalP-noTM	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS2B01G454500	EnsemblPlants:TraesCS2B01G454500.1	InterPro:XET_C	InterPro:XTH	TIGR:cd02176	SEG:seg

Description

No Description!

Coordinates

chr2B:+:649475856..649478079

Molecular Weight (calculated)

33620.4 Da

IEP (calculated)

4.409

GRAVY (calculated)

-0.095

Length

311 amino acids

Sequence
(BLAST)

001: MSRPLLAMAA AAIVVACCFA ACPVGAGASA GGFYDNFVVK WGTDPDPDRR VEIVDGGRLV TITLNNVSGA GFQSRDAFLF GEFTMEMKLV PGDSAGTVTT
101: FYLTSKDPTA VGDGHDEIDF EFLGNVSGEP YLMQTNVFAQ GVGGREQRSY LWFDPTEDFH NYTILWNPLN IIFSVDGVPV RVFRNHDANG VPYLTRQAMK
201: VHATIWDGDT WATRGGRVKI DWAHAPFVAS YGTYAASACV SAAGNGDQDG APSAFCCPGD APSWMARRLG PDGERAVAWA RDKYMVMDYC DDPWNLGRPA
301: ECDMDSLASA V

Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)

001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V

Arabidopsis Description

XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.