Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G427100.1 | Wheat | extracellular | 98.6 | 98.6 |
| TraesCS7A01G427300.1 | Wheat | extracellular | 98.6 | 98.6 |
| TraesCS7D01G419400.1 | Wheat | vacuole | 97.89 | 97.21 |
| HORVU7Hr1G098370.1 | Barley | extracellular | 96.49 | 96.49 |
| Os06t0696600-01 | Rice | extracellular | 80.35 | 79.51 |
| EER90302 | Sorghum | extracellular | 75.44 | 74.65 |
| GSMUA_Achr10P... | Banana | extracellular | 67.72 | 68.44 |
| GSMUA_Achr6P30850_001 | Banana | extracellular | 65.61 | 66.31 |
| GSMUA_Achr10P... | Banana | extracellular | 63.16 | 62.5 |
| KRH02889 | Soybean | extracellular | 63.16 | 61.86 |
| KRH19006 | Soybean | vacuole | 63.16 | 61.43 |
| Solyc07g006860.2.1 | Tomato | extracellular | 60.0 | 60.0 |
| PGSC0003DMT400048241 | Potato | extracellular | 59.3 | 59.3 |
| TraesCS7B01G326900.1 | Wheat | extracellular | 60.0 | 59.17 |
| TraesCS7B01G327200.1 | Wheat | extracellular | 58.6 | 58.39 |
| TraesCS7B01G327000.1 | Wheat | extracellular | 58.95 | 57.53 |
| Zm00001d014614_P001 | Maize | nucleus, plastid | 74.04 | 55.97 |
| Zm00001d014615_P002 | Maize | extracellular | 74.04 | 55.97 |
| TraesCS7B01G327700.1 | Wheat | extracellular | 56.84 | 55.86 |
| TraesCS2B01G454800.1 | Wheat | extracellular | 52.98 | 53.93 |
| AT2G18800.1 | Thale cress | extracellular | 56.84 | 53.11 |
| Bra038819.1-P | Field mustard | cytosol, extracellular, nucleus | 44.21 | 52.72 |
| CDY49308 | Canola | extracellular | 57.54 | 52.23 |
| CDY13000 | Canola | endoplasmic reticulum, extracellular, nucleus | 55.79 | 48.62 |
| TraesCS2B01G104700.1 | Wheat | extracellular | 47.72 | 47.72 |
| TraesCS7B01G327500.1 | Wheat | extracellular, vacuole | 49.82 | 47.49 |
| TraesCS6B01G368300.1 | Wheat | extracellular | 47.37 | 45.76 |
| TraesCS2B01G455400.1 | Wheat | extracellular | 48.42 | 45.54 |
| TraesCS2B01G059000.1 | Wheat | vacuole | 46.32 | 45.36 |
| TraesCS2B01G526500.1 | Wheat | vacuole | 45.26 | 44.64 |
| TraesCS7B01G242900.1 | Wheat | extracellular, vacuole | 44.56 | 43.94 |
| TraesCS2B01G454600.1 | Wheat | vacuole | 45.61 | 43.62 |
| TraesCS7B01G364300.1 | Wheat | extracellular | 43.16 | 43.31 |
| TraesCS2B01G454500.1 | Wheat | extracellular | 47.02 | 43.09 |
| TraesCS2B01G526600.1 | Wheat | extracellular | 43.86 | 42.81 |
| TraesCS2B01G244500.1 | Wheat | extracellular | 42.46 | 39.54 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | InterPro:Beta_glucanase | InterPro:ConA-like_dom_sf | InterPro:GH16 | InterPro:GH16_AS |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 |
| GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0010411 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 |
| GO:GO:0030312 | GO:GO:0042545 | GO:GO:0042546 | GO:GO:0048046 | GO:GO:0080022 | InterPro:IPR000757 |
| PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 | PRINTS:PR00737 | ScanProsite:PS01034 | PFscan:PS51762 |
| PANTHER:PTHR31062 | PANTHER:PTHR31062:SF47 | SUPFAM:SSF49899 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS7B01G327400 | EnsemblPlants:TraesCS7B01G327400.1 |
| InterPro:XET_C | InterPro:XTH | TIGR:cd02176 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7B:-:581373215..581374261
Molecular Weight (calculated)
31563.8 Da
IEP (calculated)
7.014
GRAVY (calculated)
-0.352
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSPRRTVV CSVLPLLLLL AGVARAAGNF YQDVDITWGD GRGKILGGGD LLTLSLDRAS GSGFQSKNQY LYGRFDMQIK LVPGDSAGTV ATFYLSSQGS
101: AHDEIDFEFL GNASGQPYTV HTNVYSQGKG GREQQFRMWF DPTADFHTYS VVWNPTHILF YVDGTPIREH RNREAATGVA YPRSQAMRVY ASVWDAEEWA
201: TQGGRVRTDW SRAPFVASYK GFAASGCASQ DAAACARSNG AWMYQELDAT ALDRLQWVQK NYMIYNYCAD TWRFKDGAPP ECATK
101: AHDEIDFEFL GNASGQPYTV HTNVYSQGKG GREQQFRMWF DPTADFHTYS VVWNPTHILF YVDGTPIREH RNREAATGVA YPRSQAMRVY ASVWDAEEWA
201: TQGGRVRTDW SRAPFVASYK GFAASGCASQ DAAACARSNG AWMYQELDAT ALDRLQWVQK NYMIYNYCAD TWRFKDGAPP ECATK
001: MAMISYSTIV VALLASFMIC SVSANFQRDV EITWGDGRGQ ITNNGDLLTL SLDKASGSGF QSKNEYLFGK IDMQIKLVAG NSAGTVTAYY LKSPGSTWDE
101: IDFEFLGNLS GDPYTLHTNV FTQGKGDREQ QFKLWFDPTS DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ PMRMYSSLWN AEEWATRGGL
201: VKTDWSKAPF TASYRGFNEE ACVVINGQSS CPNVSGQGST GSWLSQELDS TGQEQMRWVQ NNYMIYNYCT DAKRFPQGLP RECLAA
101: IDFEFLGNLS GDPYTLHTNV FTQGKGDREQ QFKLWFDPTS DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ PMRMYSSLWN AEEWATRGGL
201: VKTDWSKAPF TASYRGFNEE ACVVINGQSS CPNVSGQGST GSWLSQELDS TGQEQMRWVQ NNYMIYNYCT DAKRFPQGLP RECLAA
Arabidopsis Description
XTH23Probable xyloglucan endotransglucosylase/hydrolase protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q38910]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.