Factsheet for Zm00001d014615_P002

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 3
vacuole 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, vacuole
ChloroP:	plastid
MultiLoc:	vacuole
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

extracellular: 18088330

msms PMID: 18088330 doi

S Alvarez, EL Marsh, SG Schroeder, DP Schachtman

Donald Danforth Plant Science Center, 975 North Warson Rd, St Louis, MO, 63132, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014614_P001	Maize	nucleus, plastid	100.0	100.0
EER90302	Sorghum	extracellular	69.5	90.97
HORVU7Hr1G098370.1	Barley	extracellular	56.5	74.74
TraesCS7A01G427100.1	Wheat	extracellular	56.23	74.39
TraesCS7B01G327400.1	Wheat	extracellular	55.97	74.04
Os06t0696600-01	Rice	extracellular	56.5	73.96
TraesCS7A01G427300.1	Wheat	extracellular	55.7	73.68
TraesCS7D01G419400.1	Wheat	vacuole	55.44	72.82
GSMUA_Achr10P...	Banana	extracellular	49.6	66.31
GSMUA_Achr6P30850_001	Banana	extracellular	47.48	63.48
GSMUA_Achr10P...	Banana	extracellular	46.42	60.76
KRH02889	Soybean	extracellular	45.62	59.11
KRH19006	Soybean	vacuole	45.89	59.04
Zm00001d014617_P001	Maize	extracellular	45.09	57.05
Zm00001d014613_P001	Maize	plasma membrane	43.5	56.55
PGSC0003DMT400048241	Potato	extracellular	42.44	56.14
Solyc07g006860.2.1	Tomato	extracellular	42.18	55.79
Zm00001d009309_P001	Maize	extracellular, vacuole	39.79	54.15
AT2G18800.1	Thale cress	extracellular	42.71	52.79
Zm00001d002410_P001	Maize	extracellular	38.46	52.35
Zm00001d026250_P001	Maize	extracellular, vacuole	37.14	51.28
Bra038819.1-P	Field mustard	cytosol, extracellular, nucleus	32.36	51.05
CDY49308	Canola	extracellular	41.91	50.32
CDY13000	Canola	endoplasmic reticulum, extracellular, nucleus	41.91	48.32
Zm00001d015977_P001	Maize	mitochondrion	36.6	45.85
Zm00001d002412_P001	Maize	extracellular	35.81	45.3
Zm00001d052651_P001	Maize	extracellular	35.54	45.12
Zm00001d046007_P001	Maize	extracellular	34.75	44.41
Zm00001d053320_P001	Maize	vacuole	33.95	43.99
Zm00001d024392_P001	Maize	mitochondrion	36.6	43.81
Zm00001d026251_P001	Maize	extracellular	32.36	42.07
Zm00001d050201_P001	Maize	extracellular	32.1	41.58
Zm00001d002193_P003	Maize	extracellular, vacuole	34.75	38.87
Zm00001d024378_P001	Maize	extracellular	29.18	38.33
Zm00001d021667_P001	Maize	plasma membrane	32.36	36.97

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	UniProt:A0A1D6GUH3	ProteinID:AQK66622.1	ProteinID:AQK66623.1	InterPro:ConA-like_dom_sf
InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762
GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555
InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062
PANTHER:PTHR31062:SF47	SUPFAM:SSF49899	UniParc:UPI00022109FA	InterPro:XET_C	EnsemblPlantsGene:Zm00001d014615	EnsemblPlants:Zm00001d014615_P002
EnsemblPlants:Zm00001d014615_T002	SEG:seg	:	:	:	:

Description

xyloglucan endotransglycosylase homolog1 xyloglucan endotransglycosylase homolog1

Coordinates

chr5:+:55728573..55730436

Molecular Weight (calculated)

41788.0 Da

IEP (calculated)

9.596

GRAVY (calculated)

-0.535

Length

377 amino acids

Sequence
(BLAST)

001: MDGAASSRHP WVARRYDPST DRSSSLVQSN HISARPEASI RPARAINTAA RSPLRRRRRR IARTIVLPID RSQPVLLRDE LKPEVNRSID RSSERAPMKA
101: LILAAVLLLQ HGGAASAGGN FYQDVDITWG DGRGKILDNG QLLTLSMDRS SGSGFQSKAQ YLYGRFDMQL KLVPGDSAGT VATFYLSSQG SQHDEIDFEF
201: LGNASGEPYT VHTNVYSQGK GGREQQFRMW FDPTAAFHAY SVLWNPAHVV FYVDGVPIRE FRRRGDGTVP FPTSQPMRVY ASVWDAEEWA TQGGRVRTDW
301: SKAPFVASYR GYAAAGCTAP DAAACARSNG AWMSQELDSA GQEQLRRAQA SYMIYNYCTD KYRFPQGPPP ECSSPAK

Best Arabidopsis Sequence Match ( AT4G25810.1 )
(BLAST)

001: MAMISYSTIV VALLASFMIC SVSANFQRDV EITWGDGRGQ ITNNGDLLTL SLDKASGSGF QSKNEYLFGK IDMQIKLVAG NSAGTVTAYY LKSPGSTWDE
101: IDFEFLGNLS GDPYTLHTNV FTQGKGDREQ QFKLWFDPTS DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ PMRMYSSLWN AEEWATRGGL
201: VKTDWSKAPF TASYRGFNEE ACVVINGQSS CPNVSGQGST GSWLSQELDS TGQEQMRWVQ NNYMIYNYCT DAKRFPQGLP RECLAA

Arabidopsis Description

XTH23Probable xyloglucan endotransglucosylase/hydrolase protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q38910]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.