Factsheet for Zm00001d002412_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12801	Sorghum	extracellular	92.95	91.42
Os04t0604200-01	Rice	extracellular	70.81	72.01
TraesCS2D01G432100.1	Wheat	vacuole	71.48	70.3
TraesCS2A01G434300.1	Wheat	extracellular	71.14	69.97
TraesCS2B01G455400.1	Wheat	extracellular	71.14	69.97
HORVU2Hr1G101240.3	Barley	mitochondrion, vacuole	60.4	56.6
Zm00001d002410_P001	Maize	extracellular	51.34	55.23
Zm00001d026250_P001	Maize	extracellular, vacuole	50.0	54.58
Zm00001d024392_P001	Maize	mitochondrion	55.37	52.38
Zm00001d050201_P001	Maize	extracellular	51.01	52.23
Zm00001d026251_P001	Maize	extracellular	48.32	49.66
Zm00001d014617_P001	Maize	extracellular	48.66	48.66
Zm00001d014613_P001	Maize	plasma membrane	44.97	46.21
Zm00001d024378_P001	Maize	extracellular	43.29	44.95
Zm00001d009309_P001	Maize	extracellular, vacuole	40.6	43.68
Zm00001d053320_P001	Maize	vacuole	39.93	40.89
Zm00001d052651_P001	Maize	extracellular	39.6	39.73
Zm00001d046007_P001	Maize	extracellular	38.59	38.98
Zm00001d015977_P001	Maize	mitochondrion	36.91	36.54
Zm00001d014615_P002	Maize	extracellular	45.3	35.81
Zm00001d014614_P001	Maize	nucleus, plastid	45.3	35.81
Zm00001d002193_P003	Maize	extracellular, vacuole	38.93	34.42
Zm00001d021667_P001	Maize	plasma membrane	36.24	32.73

Protein Annotations

EntrezGene:103645979	Gene3D:2.60.120.200	MapMan:50.2.4	UniProt:A0A1D6E0F8	InterPro:ConA-like_dom_sf	InterPro:GH16
InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787
GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757
ProteinID:ONM14223.1	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034	PFscan:PS51762
PANTHER:PTHR31062	PANTHER:PTHR31062:SF102	SUPFAM:SSF49899	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002208372
InterPro:XET_C	InterPro:XTH	EnsemblPlantsGene:Zm00001d002412	EnsemblPlants:Zm00001d002412_P001	EnsemblPlants:Zm00001d002412_T001	SEG:seg

Description

Probable xyloglucan endotransglucosylase/hydrolase protein 21

Coordinates

chr2:+:12176650..12177961

Molecular Weight (calculated)

32908.7 Da

IEP (calculated)

4.636

GRAVY (calculated)

-0.258

Length

298 amino acids

Sequence
(BLAST)

001: MAAATAHLLA FLSVLTTMAA LSSVAAGGRM TDQLDILWGP TQLLNGSNGG DDQTIGLSLD RVMGSGFRSK TSYLFARIDI DIKLVPGNSA GTVTTVYLMS
101: EQQWKTHDEI DLEFLGNLTG QPYTLHTNIF ANGSGGREVQ YRLWFDPTLD FHTYSIIWSS DEILILVDNK AIRRFRNHWD VGIPFPVYQP MRLNGVLWDA
201: DDWATQGGRV KTDWSQAPFT AYFRNYRANG CEPSGSAWVC GQGPAPGGGD WLDGGAAGLD DMKRQEQLKE AEDMYMIYNY CTDSKRFPGG FPTECGLA

Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)

001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V

Arabidopsis Description

XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.