Factsheet for HORVU2Hr1G101240.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, vacuole

Predictor Summary:

vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, vacuole
Any Predictor:	mitochondrion, vacuole
MultiLoc:	vacuole
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G455400.1	Wheat	extracellular	75.79	79.54
TraesCS2D01G432100.1	Wheat	vacuole	75.47	79.21
TraesCS2A01G434300.1	Wheat	extracellular	74.84	78.55
Os04t0604200-01	Rice	extracellular	61.32	66.55
EES12801	Sorghum	extracellular	58.49	61.39
Zm00001d002412_P001	Maize	extracellular	56.6	60.4
HORVU7Hr1G106530.2	Barley	extracellular	40.88	45.3
HORVU7Hr1G098320.3	Barley	vacuole	39.31	43.25
HORVU0Hr1G022110.1	Barley	extracellular, vacuole	39.31	42.81
HORVU7Hr1G098260.1	Barley	vacuole	38.99	42.47
HORVU7Hr1G098440.2	Barley	extracellular	38.05	42.31
HORVU2Hr1G101160.1	Barley	extracellular, vacuole	38.99	41.75
HORVU7Hr1G098370.1	Barley	extracellular	35.85	40.0
HORVU7Hr1G098390.1	Barley	extracellular, vacuole	33.96	36.73
HORVU2Hr1G111060.1	Barley	vacuole	28.62	36.11
HORVU4Hr1G028720.1	Barley	extracellular, vacuole	31.76	33.44
HORVU7Hr1G098280.1	Barley	extracellular, mitochondrion, vacuole	39.31	31.25
HORVU7Hr1G081740.1	Barley	extracellular, vacuole	31.45	30.77
HORVU2Hr1G014530.3	Barley	extracellular	28.62	29.17
HORVU2Hr1G045330.4	Barley	extracellular, vacuole	32.7	28.03
HORVU2Hr1G111030.2	Barley	vacuole	26.1	25.23
HORVU2Hr1G101150.1	Barley	vacuole	28.3	25.07

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	UniProt:A0A287J723	ncoils:Coil	InterPro:ConA-like_dom_sf	InterPro:GH16
InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787
GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	EnsemblPlantsGene:HORVU2Hr1G101240
EnsemblPlants:HORVU2Hr1G101240.3	InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034
PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF102	SUPFAM:SSF49899	UniParc:UPI000B46025F	InterPro:XET_C
InterPro:XTH	SEG:seg	:	:	:	:

Description

Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A287J723]

Coordinates

chrchr2H:-:693384824..693386162

Molecular Weight (calculated)

31263.0 Da

IEP (calculated)

5.837

GRAVY (calculated)

-0.315

Length

318 amino acids

Sequence
(BLAST)

001: IYPALDRGWH AAPAHYSHSL HSTGTMALAR ERLLASLSAL ALMIAAWASP AGGRPTTDQL EILWGQTQVL NDGNGDQTIG LTLDQAMGSA FKSKTSYLFA
101: RIDVDIKLIP RNSAGTVTTI YLISEKDWKT HDEVDLEFLG NATGQPYTLH TNIFANGEGG REMQYRLWFD PTQDFHTYSI VWNTDEILIL VDGVPIRQFK
201: NHWDAGVPFP VYQPMRLFGC LWNADDXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXGWMD RARGGGRLDD DVKQQQQLRE VQGKYMIYNY
301: CTDAKRFPNG FPKECGLA

Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)

001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V

Arabidopsis Description

XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.