Factsheet for HORVU4Hr1G028720.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G142800.1	Wheat	extracellular	94.04	96.6
TraesCS4A01G172600.1	Wheat	unclear	94.04	96.6
TraesCSU01G175000.1	Wheat	vacuole	93.38	95.92
Os11t0539200-01	Rice	extracellular	85.43	87.46
Zm00001d052651_P001	Maize	extracellular	82.45	83.84
OQU83588	Sorghum	extracellular	83.77	83.5
GSMUA_Achr8P34300_001	Banana	cytosol	75.17	82.85
Bra008796.1-P	Field mustard	cytosol, extracellular, nucleus	71.52	77.42
AT5G13870.2	Thale cress	extracellular, vacuole	72.19	74.4
CDX69621	Canola	vacuole	72.19	74.4
CDY09832	Canola	vacuole	71.85	74.06
VIT_01s0150g00460.t01	Wine grape	extracellular	75.17	73.94
CDY69237	Canola	extracellular	71.52	73.22
Bra006220.1-P	Field mustard	vacuole	70.86	73.04
Bra013164.1-P	Field mustard	extracellular	71.19	72.88
KRG94750	Soybean	endoplasmic reticulum	71.19	72.88
CDX93096	Canola	extracellular	70.86	72.54
KRH06776	Soybean	endoplasmic reticulum	70.53	72.2
CDX78542	Canola	vacuole	70.86	71.81
CDX70524	Canola	vacuole	70.53	71.48
AT2G06850.1	Thale cress	extracellular	69.54	70.95
KRH70105	Soybean	nucleus	72.19	70.55
PGSC0003DMT400005591	Potato	extracellular	68.54	69.93
Solyc11g040140.1.1	Tomato	extracellular	68.21	68.67
KRG94748	Soybean	extracellular, vacuole	56.62	66.02
KRH06775	Soybean	endoplasmic reticulum	72.19	63.19
HORVU7Hr1G098440.2	Barley	extracellular	49.01	51.75
HORVU7Hr1G098320.3	Barley	vacuole	47.35	49.48
HORVU7Hr1G098370.1	Barley	extracellular	46.36	49.12
HORVU0Hr1G022110.1	Barley	extracellular, vacuole	47.35	48.97
HORVU7Hr1G098260.1	Barley	vacuole	46.36	47.95
HORVU7Hr1G098390.1	Barley	extracellular, vacuole	41.72	42.86
GSMUA_Achr7P02620_001	Banana	endoplasmic reticulum, extracellular	61.26	41.86
HORVU2Hr1G111060.1	Barley	vacuole	34.11	40.87
HORVU7Hr1G106530.2	Barley	extracellular	36.09	37.98
HORVU2Hr1G045330.4	Barley	extracellular, vacuole	46.36	37.74
HORVU2Hr1G101160.1	Barley	extracellular, vacuole	37.09	37.71
HORVU7Hr1G081740.1	Barley	extracellular, vacuole	40.4	37.54
HORVU7Hr1G098280.1	Barley	extracellular, mitochondrion, vacuole	46.69	35.25
HORVU2Hr1G014530.3	Barley	extracellular	36.09	34.94
HORVU2Hr1G111030.2	Barley	vacuole	35.43	32.52
HORVU2Hr1G101240.3	Barley	mitochondrion, vacuole	33.44	31.76
HORVU2Hr1G101150.1	Barley	vacuole	36.76	30.92

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	UniProt:A0A287NP77	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798
GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	EnsemblPlantsGene:HORVU4Hr1G028720	EnsemblPlants:HORVU4Hr1G028720.1
InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034	PFscan:PS51762
PANTHER:PTHR31062	PANTHER:PTHR31062:SF97	SUPFAM:SSF49899	SignalP:SignalP-noTM	UniParc:UPI000B47A4DB	InterPro:XET_C
InterPro:XTH	SEG:seg	:	:	:	:

Description

Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A287NP77]

Coordinates

chrchr4H:-:179949762..179952022

Molecular Weight (calculated)

34305.1 Da

IEP (calculated)

6.719

GRAVY (calculated)

-0.538

Length

302 amino acids

Sequence
(BLAST)

001: GGGREAGEMK ATAGALLAVV ATVLLRGIAA APPRKPVDVP FEKNYVPTWA EDHIHYVNGG REVQLSLDKT TGTGFQTRGS YLFGHFSMHI KLVGGDSAGT
101: VTAFYVPSQN SEHDEIDFEF LGNRTGQPYI LQTNVFSGGK GDREQRIYLW FDPTKDYHSY SVLWNLYMIA FFVDDTPIRV FKNSKDLGVR YPFDQPMKLY
201: SSLWNADDWA TRGGREKTDW SKAPFVASYR GFHVDGCEAS AEAKLCATQG ARWWDQPEFQ DLDAAQYRRL AWVRKEHTIY NYCTDRERYA AMSPECKRDR
301: DV

Best Arabidopsis Sequence Match ( AT5G13870.3 )
(BLAST)

001: MGRLSSTLCL TFLILATVAF GVPPKKSINV PFGRNYFPTW AFDHIKYLNG GSEVHLVLDK YTGTGFQSKG SYLFGHFSMH IKMVAGDSAG TVTAFYLSSQ
101: NSEHDEIDFE FLGNRTGQPY ILQTNVFTGG AGNREQRINL WFDPSKDYHS YSVLWNMYQI VFFVDDVPIR VFKNSKDVGV KFPFNQPMKI YSSLWNADDW
201: ATRGGLEKTN WEKAPFVASY RGFHVDGCEA SVNAKFCETQ GKRWWDQKEF QDLDANQYKR LKWVRKRYTI YNYCTDRVRF PVPPPECRRD RDI

Arabidopsis Description

XTH5Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:Q67Z90]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.