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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX69621 Canola vacuole 98.98 98.98
Bra008796.1-P Field mustard cytosol, extracellular, nucleus 94.2 98.92
AT5G13870.2 Thale cress extracellular, vacuole 93.86 93.86
CDX78542 Canola vacuole 93.86 92.28
CDX70524 Canola vacuole 93.52 91.95
GSMUA_Achr8P34300_001 Banana cytosol 76.45 81.75
CDY69237 Canola extracellular 77.47 76.95
CDX93096 Canola extracellular 77.47 76.95
VIT_01s0150g00460.t01 Wine grape extracellular 79.52 75.9
TraesCSU01G175000.1 Wheat vacuole 75.09 74.83
TraesCS4A01G172600.1 Wheat unclear 74.74 74.49
TraesCS4D01G142800.1 Wheat extracellular 74.4 74.15
Zm00001d052651_P001 Maize extracellular 73.72 72.73
HORVU4Hr1G028720.1 Barley extracellular, vacuole 74.06 71.85
Os11t0539200-01 Rice extracellular 72.01 71.53
OQU83588 Sorghum extracellular 73.38 70.96
CDY02738 Canola extracellular, nucleus, vacuole 38.57 52.56
CDY14905 Canola extracellular 48.12 52.03
CDY66832 Canola extracellular 48.12 52.03
CDX68640 Canola extracellular 49.83 51.77
CDY39193 Canola extracellular 47.78 51.47
CDY61576 Canola vacuole 49.15 51.43
CDY28174 Canola extracellular 49.49 51.42
CDX94413 Canola extracellular 50.17 51.22
CDY27126 Canola extracellular 50.51 51.21
CDX72228 Canola extracellular 48.46 50.9
CDX89393 Canola extracellular 49.83 50.87
CDX72227 Canola extracellular 46.76 50.55
CDY08756 Canola extracellular 48.46 49.82
CDY45623 Canola extracellular 48.46 49.82
CDY53771 Canola extracellular 49.15 49.66
CDX90896 Canola extracellular 48.81 49.31
CDY22110 Canola extracellular 48.81 49.31
CDY21985 Canola extracellular 48.81 49.31
CDY67779 Canola extracellular 47.78 48.95
CDY25904 Canola extracellular 47.44 48.94
CDY67778 Canola extracellular 47.44 48.94
CDY67488 Canola extracellular 47.1 48.76
CDY11863 Canola extracellular 47.44 48.6
CDY59999 Canola extracellular 40.96 48.58
CDX88627 Canola extracellular 47.1 48.25
CDX97967 Canola extracellular 49.15 48.16
CDY49788 Canola extracellular 49.15 48.16
CDY25903 Canola extracellular 42.66 48.08
CDY67487 Canola extracellular 42.66 48.08
CDX72656 Canola extracellular, vacuole 47.78 47.95
CDY31620 Canola extracellular, vacuole 47.44 47.44
CDY59998 Canola extracellular 45.73 47.35
CDY69806 Canola extracellular 45.73 47.18
CDX92733 Canola extracellular 44.71 45.8
CDY50186 Canola extracellular 44.71 45.8
CDY03539 Canola endoplasmic reticulum, extracellular 48.12 45.19
CDY35228 Canola extracellular 43.34 43.49
CDY49308 Canola extracellular 46.42 43.31
CDY06861 Canola extracellular 42.66 42.81
CDY12366 Canola extracellular 40.96 42.25
CDX71167 Canola vacuole 42.66 42.09
GSMUA_Achr7P02620_001 Banana endoplasmic reticulum, extracellular 63.48 42.08
CDY13000 Canola endoplasmic reticulum, extracellular, nucleus 46.08 41.28
CDY02741 Canola extracellular 41.3 41.16
Protein Annotations
KEGG:00500+2.4.1.20Gene3D:2.60.120.200MapMan:50.2.4GO:A0A078F9R9UniProt:A0A078F9R9EnsemblPlants:CDY09832
ProteinID:CDY09832ProteinID:CDY09832.1InterPro:ConA-like_dom_sfInterPro:GH16InterPro:GH16_ASGO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0005575GO:GO:0005576GO:GO:0005618GO:GO:0005623
GO:GO:0005975GO:GO:0006073GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0010411
GO:GO:0016043GO:GO:0016740GO:GO:0016762GO:GO:0016787GO:GO:0016798GO:GO:0030312
GO:GO:0042546GO:GO:0048046GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00031564001InterPro:IPR000757PFAM:PF00722
PFAM:PF06955PIRSF:PIRSF005604ScanProsite:PS01034PFscan:PS51762PANTHER:PTHR31062PANTHER:PTHR31062:SF97
SUPFAM:SSF49899SignalP:SignalP-noTMUniParc:UPI0001B6365AInterPro:XET_CInterPro:XTH:
Description
BnaC09g43290DXyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A078F9R9]
Coordinates
chrLK031999:-:405880..407125
Molecular Weight (calculated)
34007.4 Da
IEP (calculated)
9.184
GRAVY (calculated)
-0.430
Length
293 amino acids
Sequence
(BLAST)
001: MGRLPLTLCL TFLVMATVTF GMPPKKAVDV PFGRNYFPTW AFDHIKYLNG GSEVHLILDK YTGTGFQSKG SYLFGHFSMH IKMVPGDSAG TVTAFYLSSQ
101: SSVHDEIDFE FLGNRTGQPY ILQTNVFTGG KGNREQRINL WFDPSKDYHS YSVLWNMYQI VFFVDDVPIR VFKNSKDIGV KFPFNQPMKI YSSLWNADDW
201: ATRGGLEKTN WAKAPFVASY RGFHVDGCEA SVNAKFCETQ GKRWWDQKEF QDLDAQQYKR LKWVRTRYTI YNYCTDRVRF PVPPPECRRD RDI
Best Arabidopsis Sequence Match ( AT5G13870.3 )
(BLAST)
001: MGRLSSTLCL TFLILATVAF GVPPKKSINV PFGRNYFPTW AFDHIKYLNG GSEVHLVLDK YTGTGFQSKG SYLFGHFSMH IKMVAGDSAG TVTAFYLSSQ
101: NSEHDEIDFE FLGNRTGQPY ILQTNVFTGG AGNREQRINL WFDPSKDYHS YSVLWNMYQI VFFVDDVPIR VFKNSKDVGV KFPFNQPMKI YSSLWNADDW
201: ATRGGLEKTN WEKAPFVASY RGFHVDGCEA SVNAKFCETQ GKRWWDQKEF QDLDANQYKR LKWVRKRYTI YNYCTDRVRF PVPPPECRRD RDI
Arabidopsis Description
XTH5Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:Q67Z90]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.