CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25903	Canola	extracellular	97.98	93.08
CDY67487	Canola	extracellular	97.57	92.69
CDY02741	Canola	extracellular	92.31	77.55
CDX89393	Canola	extracellular	84.21	72.47
CDX94413	Canola	extracellular	83.81	72.13
CDY39193	Canola	extracellular	72.06	65.44
CDX72228	Canola	extracellular	72.87	64.52
CDY66832	Canola	extracellular	70.45	64.21
CDX68640	Canola	extracellular	72.87	63.83
CDY28174	Canola	extracellular	72.87	63.83
CDY14905	Canola	extracellular	69.23	63.1
KRH19136	Soybean	nucleus	70.85	61.84
VIT_11s0052g01220.t01	Wine grape	extracellular	70.45	61.05
CDX72227	Canola	extracellular	66.4	60.52
KRH37378	Soybean	nucleus	63.97	59.4
PGSC0003DMT400036329	Potato	extracellular	65.59	57.45
CDY25904	Canola	extracellular	65.18	56.69
CDY67778	Canola	extracellular	64.78	56.34
Solyc05g046290.2.1	Tomato	extracellular	65.18	55.9
CDY03539	Canola	endoplasmic reticulum, extracellular	70.45	55.77
VIT_11s0052g01250.t01	Wine grape	extracellular	65.18	55.71
Solyc07g009380.2.1	Tomato	extracellular, nucleus	61.13	54.91
CDY02738	Canola	extracellular, nucleus, vacuole	46.15	53.02
CDY69806	Canola	extracellular	60.73	52.82
CDY11863	Canola	extracellular	61.13	52.8
CDY67488	Canola	extracellular	60.32	52.65
CDX88627	Canola	extracellular	60.73	52.45
CDY67779	Canola	extracellular	60.73	52.45
CDY49308	Canola	extracellular	65.18	51.27
CDY27126	Canola	extracellular	59.92	51.21
CDY59998	Canola	extracellular	58.3	50.88
CDY61576	Canola	vacuole	57.09	50.36
CDY50186	Canola	extracellular	58.3	50.35
CDX92733	Canola	extracellular	57.89	50.0
KRH12375	Soybean	extracellular	63.56	49.68
CDY13000	Canola	endoplasmic reticulum, extracellular, nucleus	63.97	48.32
CDY12366	Canola	extracellular	55.06	47.89
CDX69621	Canola	vacuole	48.58	40.96
CDY09832	Canola	vacuole	48.58	40.96
CDX78542	Canola	vacuole	48.58	40.27
CDX70524	Canola	vacuole	48.18	39.93
CDY06861	Canola	extracellular	46.96	39.73
CDX72656	Canola	extracellular, vacuole	46.96	39.73
CDY31620	Canola	extracellular, vacuole	46.96	39.59
CDY35228	Canola	extracellular	46.56	39.38
CDX93096	Canola	extracellular	46.96	39.32
CDY08756	Canola	extracellular	45.34	39.3
CDY45623	Canola	extracellular	45.34	39.3
CDY69237	Canola	extracellular	46.56	38.98
CDY53771	Canola	extracellular	44.13	37.59
CDY22110	Canola	extracellular	44.13	37.59
CDY21985	Canola	extracellular	44.13	37.59
CDX90896	Canola	extracellular	43.72	37.24
CDY49788	Canola	extracellular	42.51	35.12
CDX97967	Canola	extracellular	42.11	34.78
CDX71167	Canola	vacuole	41.7	34.68

Protein Annotations

KEGG:00500+2.4.1.20	Gene3D:2.60.120.200	MapMan:50.2.4	GO:A0A078J8V9	UniProt:A0A078J8V9	InterPro:Beta_glucanase
EnsemblPlants:CDY59999	ProteinID:CDY59999	ProteinID:CDY59999.1	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798
GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	EnsemblPlantsGene:GSBRNA2T00028019001	InterPro:IPR000757
PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	PRINTS:PR00737	ScanProsite:PS01034	PFscan:PS51762
PANTHER:PTHR31062	PANTHER:PTHR31062:SF20	SUPFAM:SSF49899	SignalP:SignalP-noTM	UniParc:UPI0004EE45A0	InterPro:XET_C
InterPro:XTH	SEG:seg	:	:	:	:

Description

BnaA02g35330DXyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A078J8V9]

Coordinates

chrLK033830:+:19931..20992

Molecular Weight (calculated)

28061.2 Da

IEP (calculated)

7.284

GRAVY (calculated)

-0.455

Length

247 amino acids

Sequence
(BLAST)

001: MANSYLFPLF LSLIVISSVS ANFQRDVEIT WGDGRGQITN NGELLTLSLD KSSGSGFQSK NEYLFGKIDM QMKLVPGNSA GTVTTLYLKS PGTTWDEIDF
101: EFLGNLSGDP YTLHTNVYTQ GKGDKEQQFK LWFDPTADFH TYTILWNPQR IIFTVDGTPI REFKNMESIG TLFPKNRPMR MYSSLWNADD WATRACVWSN
201: GKSSCPNGSG QGTTERMRWV QKNYMIYNYC TDTKRFPQGL PKECFAA

Best Arabidopsis Sequence Match ( AT4G25810.1 )
(BLAST)

001: MAMISYSTIV VALLASFMIC SVSANFQRDV EITWGDGRGQ ITNNGDLLTL SLDKASGSGF QSKNEYLFGK IDMQIKLVAG NSAGTVTAYY LKSPGSTWDE
101: IDFEFLGNLS GDPYTLHTNV FTQGKGDREQ QFKLWFDPTS DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ PMRMYSSLWN AEEWATRGGL
201: VKTDWSKAPF TASYRGFNEE ACVVINGQSS CPNVSGQGST GSWLSQELDS TGQEQMRWVQ NNYMIYNYCT DAKRFPQGLP RECLAA

Arabidopsis Description

XTH23Probable xyloglucan endotransglucosylase/hydrolase protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q38910]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.