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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra013164.1-P Field mustard extracellular 99.66 99.66
CDY69237 Canola extracellular 98.31 98.31
AT2G06850.1 Thale cress extracellular 95.93 95.61
CDX69621 Canola vacuole 77.29 77.82
GSMUA_Achr8P34300_001 Banana cytosol 72.2 77.74
CDY09832 Canola vacuole 76.95 77.47
CDX70524 Canola vacuole 76.27 75.5
CDX78542 Canola vacuole 75.93 75.17
KRG94750 Soybean endoplasmic reticulum 73.9 73.9
KRH06776 Soybean endoplasmic reticulum 73.56 73.56
TraesCS4D01G142800.1 Wheat extracellular 73.22 73.47
TraesCS4A01G172600.1 Wheat unclear 73.22 73.47
TraesCSU01G175000.1 Wheat vacuole 72.88 73.13
Zm00001d052651_P001 Maize extracellular 72.88 72.39
Os11t0539200-01 Rice extracellular 71.86 71.86
PGSC0003DMT400005591 Potato extracellular 71.86 71.62
KRH70105 Soybean nucleus 74.58 71.2
OQU83588 Sorghum extracellular 72.88 70.96
HORVU4Hr1G028720.1 Barley extracellular, vacuole 72.54 70.86
Solyc11g040140.1.1 Tomato extracellular 71.53 70.33
KRG94748 Soybean extracellular, vacuole 60.34 68.73
KRH06775 Soybean endoplasmic reticulum 74.24 63.48
CDY02738 Canola extracellular, nucleus, vacuole 37.29 51.16
CDY61576 Canola vacuole 48.47 51.07
CDY66832 Canola extracellular 46.44 50.55
CDY27126 Canola extracellular 49.15 50.17
CDY14905 Canola extracellular 45.76 49.82
CDY39193 Canola extracellular 45.76 49.63
CDY28174 Canola extracellular 47.12 49.29
CDY67488 Canola extracellular 47.12 49.12
CDX68640 Canola extracellular 46.78 48.94
CDX72228 Canola extracellular 46.1 48.75
CDX72227 Canola extracellular 44.75 48.71
CDX89393 Canola extracellular 47.12 48.43
CDX94413 Canola extracellular 47.12 48.43
CDY67779 Canola extracellular 46.78 48.25
CDY11863 Canola extracellular 46.78 48.25
CDY22110 Canola extracellular 47.12 47.93
CDX90896 Canola extracellular 47.12 47.93
CDY53771 Canola extracellular 47.12 47.93
CDY21985 Canola extracellular 47.12 47.93
CDX88627 Canola extracellular 46.44 47.9
CDY25904 Canola extracellular 46.1 47.89
CDY67778 Canola extracellular 46.1 47.89
CDX97967 Canola extracellular 48.47 47.83
CDY49788 Canola extracellular 48.47 47.83
CDY08756 Canola extracellular 45.76 47.37
CDY45623 Canola extracellular 45.76 47.37
CDX72656 Canola extracellular, vacuole 46.78 47.26
CDY59999 Canola extracellular 39.32 46.96
CDY69806 Canola extracellular 45.08 46.83
CDY31620 Canola extracellular, vacuole 46.44 46.76
CDY25903 Canola extracellular 41.02 46.54
CDY67487 Canola extracellular 40.68 46.15
CDY50186 Canola extracellular 44.41 45.8
CDX92733 Canola extracellular 44.41 45.8
CDY59998 Canola extracellular 43.05 44.88
CDY03539 Canola endoplasmic reticulum, extracellular 46.44 43.91
CDY49308 Canola extracellular 45.08 42.36
CDY12366 Canola extracellular 40.68 42.25
CDX71167 Canola vacuole 42.37 42.09
CDY35228 Canola extracellular 40.68 41.1
CDY13000 Canola endoplasmic reticulum, extracellular, nucleus 45.08 40.67
CDY06861 Canola extracellular 40.0 40.41
GSMUA_Achr7P02620_001 Banana endoplasmic reticulum, extracellular 58.64 39.14
CDY02741 Canola extracellular 38.98 39.12
Protein Annotations
KEGG:00500+2.4.1.20Gene3D:2.60.120.200MapMan:50.2.4GO:A0A078DUY3InterPro:Beta_glucanaseEnsemblPlants:CDX93096
ProteinID:CDX93096ProteinID:CDX93096.1InterPro:ConA-like_dom_sfInterPro:GH16InterPro:GH16_ASGO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0005575GO:GO:0005576GO:GO:0005618GO:GO:0005623
GO:GO:0005975GO:GO:0006073GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0010411
GO:GO:0016043GO:GO:0016740GO:GO:0016762GO:GO:0016787GO:GO:0030312GO:GO:0042546
GO:GO:0048046GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00155007001InterPro:IPR000757PFAM:PF00722PFAM:PF06955
PIRSF:PIRSF005604PRINTS:PR00737ScanProsite:PS01034PFscan:PS51762PANTHER:PTHR31062PANTHER:PTHR31062:SF97
SUPFAM:SSF49899SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EF315DInterPro:XET_CInterPro:XTH
Description
BnaA03g38180D
Coordinates
chrLK031874:-:1166998..1169003
Molecular Weight (calculated)
34034.4 Da
IEP (calculated)
8.999
GRAVY (calculated)
-0.363
Length
295 amino acids
Sequence
(BLAST)
001: MAVSSAPWAL VALFLMASST VMAIPPRKAI DVPFGRNYVP TWAFDHQKQL NGGSELQLIL DKYTGTGFQS KGSYLFGHFS MHIKLPAGDT AGVVTAFYLS
101: STNNEHDEID FEFLGNRTGQ PAILQTNVFT GGKGNREQRI YLWFDPSKAY HTYSILWNLY QIVFFVDNIP IRVFKNAKDL GVRFPFNQPM KLYSSLWNAD
201: DWATRGGLEK TNWANAPFIA SYRGFHIDGC QASVEAKYCA TQGRMWWDQN EFRDLDAEQY RRLKWVRMKW TIYNYCTDRT RFPVMPAECK RDRDV
Best Arabidopsis Sequence Match ( AT2G06850.1 )
(BLAST)
001: MTVSSSPWAL MALFLMVSST MVMAIPPRKA IDVPFGRNYV PTWAFDHQKQ FNGGSELQLI LDKYTGTGFQ SKGSYLFGHF SMHIKLPAGD TAGVVTAFYL
101: SSTNNEHDEI DFEFLGNRTG QPAILQTNVF TGGKGNREQR IYLWFDPSKA YHTYSILWNM YQIVFFVDNI PIRTFKNAKD LGVRFPFNQP MKLYSSLWNA
201: DDWATRGGLE KTNWANAPFV ASYKGFHIDG CQASVEAKYC ATQGRMWWDQ KEFRDLDAEQ WRRLKWVRMK WTIYNYCTDR TRFPVMPAEC KRDRDA
Arabidopsis Description
XTH4Xyloglucan endotransglucosylase/hydrolase protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q39099]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.