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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra017855.1-P Field mustard extracellular, vacuole 98.98 99.32
CDX72656 Canola extracellular, vacuole 98.98 99.32
AT4G37800.1 Thale cress extracellular, vacuole 93.86 93.86
GSMUA_Achr8P26470_001 Banana extracellular 75.09 76.92
GSMUA_Achr3P26220_001 Banana extracellular 73.38 75.17
GSMUA_Achr8P05120_001 Banana extracellular 72.7 74.48
KRH04364 Soybean extracellular 72.35 72.6
KRH58172 Soybean extracellular, vacuole 72.01 72.51
CDY45623 Canola extracellular 70.31 72.28
CDY08756 Canola extracellular 70.31 72.28
PGSC0003DMT400055138 Potato extracellular 72.01 71.53
KRH77174 Soybean extracellular 72.01 71.28
Solyc02g091920.2.1 Tomato nucleus 71.67 71.19
KRH28311 Soybean extracellular, vacuole 71.33 70.37
GSMUA_Achr1P10380_001 Banana extracellular, vacuole 64.85 64.41
CDY02738 Canola extracellular, nucleus, vacuole 35.15 47.91
CDY53771 Canola extracellular 47.1 47.59
CDX69621 Canola vacuole 47.44 47.44
CDY09832 Canola vacuole 47.44 47.44
CDY59999 Canola extracellular 39.59 46.96
CDY22110 Canola extracellular 46.42 46.9
CDX90896 Canola extracellular 46.42 46.9
CDY21985 Canola extracellular 46.42 46.9
CDX78542 Canola vacuole 47.44 46.64
CDX93096 Canola extracellular 46.76 46.44
CDX89393 Canola extracellular 45.39 46.34
CDX70524 Canola vacuole 47.1 46.31
CDY25904 Canola extracellular 44.71 46.13
CDY69237 Canola extracellular 46.42 46.1
CDX94413 Canola extracellular 45.05 45.99
CDX71167 Canola vacuole 46.42 45.79
CDY67778 Canola extracellular 44.37 45.77
CDY25903 Canola extracellular 40.61 45.77
CDY39193 Canola extracellular 42.32 45.59
CDY67488 Canola extracellular 44.03 45.58
CDY69806 Canola extracellular 44.03 45.42
CDY66832 Canola extracellular 41.98 45.39
CDY67487 Canola extracellular 40.27 45.38
CDY59998 Canola extracellular 43.69 45.23
CDY67779 Canola extracellular 44.03 45.1
CDX92733 Canola extracellular 44.03 45.1
CDY14905 Canola extracellular 41.64 45.02
CDY61576 Canola vacuole 43.0 45.0
CDX72228 Canola extracellular 42.66 44.8
CDY50186 Canola extracellular 43.69 44.76
CDY11863 Canola extracellular 43.69 44.76
CDY27126 Canola extracellular 44.03 44.64
CDY49788 Canola extracellular 45.05 44.15
CDX97967 Canola extracellular 44.71 43.81
CDX88627 Canola extracellular 42.66 43.71
CDY28174 Canola extracellular 41.98 43.62
CDX72227 Canola extracellular 40.27 43.54
CDX68640 Canola extracellular 41.3 42.91
CDY35228 Canola extracellular 42.32 42.47
CDY06861 Canola extracellular 41.98 42.12
CDY49308 Canola extracellular 43.0 40.13
CDY03539 Canola endoplasmic reticulum, extracellular 41.98 39.42
CDY13000 Canola endoplasmic reticulum, extracellular, nucleus 43.0 38.53
CDY02741 Canola extracellular 38.57 38.44
CDY12366 Canola extracellular 36.86 38.03
Protein Annotations
KEGG:00500+2.4.1.20Gene3D:2.60.120.200MapMan:50.2.4GO:A0A078GYU1UniProt:A0A078GYU1EnsemblPlants:CDY31620
ProteinID:CDY31620ProteinID:CDY31620.1InterPro:ConA-like_dom_sfInterPro:GH16InterPro:GH16_ASGO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0005575GO:GO:0005576GO:GO:0005618GO:GO:0005623
GO:GO:0005975GO:GO:0006073GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0010411
GO:GO:0016043GO:GO:0016740GO:GO:0016762GO:GO:0016787GO:GO:0016798GO:GO:0030312
GO:GO:0042546GO:GO:0048046GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00050163001InterPro:IPR000757PFAM:PF00722
PFAM:PF06955PIRSF:PIRSF005604ScanProsite:PS01034PFscan:PS51762PANTHER:PTHR31062PANTHER:PTHR31062:SF48
SUPFAM:SSF49899SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI0004EF432BInterPro:XET_CInterPro:XTH
Description
BnaA03g54320DXyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A078GYU1]
Coordinates
chrLK032275:+:456411..460466
Molecular Weight (calculated)
33525.5 Da
IEP (calculated)
7.493
GRAVY (calculated)
-0.388
Length
293 amino acids
Sequence
(BLAST)
001: MVVSLFSARN AFFISLCLFA ALYRPVLSKP AKFADDFRIT WSDTHITQID GGRAIQLKLD PSSGCGFASK KQYLFGRVSM KIKLIPGDSA GTVAAFYMNS
101: DTDSVRDELD FEFLGNRSGQ PYTVQTNVFA HGKGDREQRV NLWFDPSRDF HEYAISWNHL RIVFYVDNVP IRVYKNNEAR KVPYPRFQPM GVYSTLWEAD
201: DWATRGGIEQ INWSEAPFYA YYKDFDIEGC SVPGPAGCPA NPKNWWEGSA YHHQLTPVEA RSYRWVRVNH MIYDYCTDKS RFPVPPPECS AGI
Best Arabidopsis Sequence Match ( AT4G37800.1 )
(BLAST)
001: MVVSLFSSRN VFYTLSLCLF AALYQPVMSR PAKFEDDFRI AWSDTHITQI DGGRAIQLKL DPSSGCGFAS KKQYLFGRVS MKIKLIPGDS AGTVTAFYMN
101: SDTDSVRDEL DFEFLGNRSG QPYTVQTNVF AHGKGDREQR VNLWFDPSRD FHEYAISWNH LRIVFYVDNV PIRVYKNNEA RKVPYPRFQP MGVYSTLWEA
201: DDWATRGGIE KINWSRAPFY AYYKDFDIEG CPVPGPADCP ANSKNWWEGS AYHQLSPVEA RSYRWVRVNH MVYDYCTDKS RFPVPPPECS AGI
Arabidopsis Description
XTH7Probable xyloglucan endotransglucosylase/hydrolase protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8LER3]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.