Factsheet for GSMUA_Achr8P05120_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P26220_001	Banana	extracellular	91.26	91.26
GSMUA_Achr8P26470_001	Banana	extracellular	89.16	89.16
KRH58172	Soybean	extracellular, vacuole	76.22	74.91
KRH04364	Soybean	extracellular	75.87	74.32
Bra017855.1-P	Field mustard	extracellular, vacuole	75.17	73.63
PGSC0003DMT400055138	Potato	extracellular	75.87	73.56
KRH77174	Soybean	extracellular	75.87	73.31
CDX72656	Canola	extracellular, vacuole	74.83	73.29
Solyc02g091920.2.1	Tomato	nucleus	75.52	73.22
AT4G37800.1	Thale cress	extracellular, vacuole	74.83	73.04
KRH28311	Soybean	extracellular, vacuole	75.52	72.73
CDY31620	Canola	extracellular, vacuole	74.48	72.7
Bra024415.1-P	Field mustard	extracellular	71.33	71.58
CDY08756	Canola	extracellular	71.33	71.58
CDY45623	Canola	extracellular	70.98	71.23
AT5G65730.1	Thale cress	extracellular	71.68	70.21
GSMUA_Achr1P10380_001	Banana	extracellular, vacuole	68.18	66.1
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	37.76	55.96
GSMUA_Achr10P...	Banana	cytosol	38.81	55.78
GSMUA_Achr3P05220_001	Banana	cytosol	40.21	55.29
GSMUA_Achr9P13820_001	Banana	cytosol	39.86	54.55
GSMUA_Achr8P15560_001	Banana	cytosol, extracellular, nucleus	39.86	54.03
GSMUA_Achr7P16430_001	Banana	cytosol	39.86	53.52
GSMUA_Achr5P21880_001	Banana	cytosol	39.16	52.58
GSMUA_Achr8P34300_001	Banana	cytosol	50.35	52.55
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	34.97	50.76
GSMUA_Achr1P08500_001	Banana	extracellular	47.9	50.55
GSMUA_Achr10P...	Banana	extracellular	48.95	49.65
GSMUA_Achr9P11180_001	Banana	extracellular, vacuole	48.6	49.47
GSMUA_Achr5P19320_001	Banana	vacuole	48.6	48.94
GSMUA_Achr9P29980_001	Banana	extracellular, vacuole	45.1	48.31
GSMUA_Achr6P30850_001	Banana	extracellular	47.2	47.87
GSMUA_Achr6P19100_001	Banana	extracellular, vacuole	44.76	47.41
GSMUA_Achr10P...	Banana	extracellular	46.85	46.53
GSMUA_Achr1P14290_001	Banana	vacuole	45.45	43.92
GSMUA_Achr8P19740_001	Banana	extracellular	40.21	42.75
GSMUA_Achr3P03390_001	Banana	extracellular	43.36	42.18
GSMUA_Achr7P10940_001	Banana	extracellular	39.16	40.29
GSMUA_Achr7P02620_001	Banana	endoplasmic reticulum, extracellular	44.06	28.51

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411
GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312
GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	EnsemblPlantsGene:GSMUA_Achr8G05120_001	EnsemblPlants:GSMUA_Achr8P05120_001	EnsemblPlants:GSMUA_Achr8T05120_001
InterPro:IPR000757	UniProt:M0TMR5	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034
PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF48	SUPFAM:SSF49899	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000296AAD6	InterPro:XET_C	InterPro:XTH	:	:	:

Description

Probable xyloglucan endotransglucosylase/hydrolase protein 7 [Source:GMGC_GENE;Acc:GSMUA_Achr8G05120_001]

Coordinates

chr8:-:3354524..3356190

Molecular Weight (calculated)

32578.4 Da

IEP (calculated)

6.666

GRAVY (calculated)

-0.414

Length

286 amino acids

Sequence
(BLAST)

001: MGRTTVLSLT FFLLALVAIV GARPATFLQD FRITWAETHI KQLQGGTAIQ LMLDPSSGCG FASNKQYQYG RVSMKIKLIP ADSAGTVTAF YMNSDTDTVR
101: DELDFEFLGN RSGQPYTVQT NIYAHGKGDR EQRVNLWFDP AADYHTYSIL WNHYHVVFSV DDVPIRVYKN NEGRGVPYPK AQPMGVYSTL WEADDWATRG
201: GLEKIDWSKA PFYAYYKDFD IEGCAVPGPA NCASNPNNWW EGAVYRQLSP EQARKYRWVR TQYMIYDYCT DKSRYPVPPP ECLSGI

Best Arabidopsis Sequence Match ( AT4G37800.1 )
(BLAST)

001: MVVSLFSSRN VFYTLSLCLF AALYQPVMSR PAKFEDDFRI AWSDTHITQI DGGRAIQLKL DPSSGCGFAS KKQYLFGRVS MKIKLIPGDS AGTVTAFYMN
101: SDTDSVRDEL DFEFLGNRSG QPYTVQTNVF AHGKGDREQR VNLWFDPSRD FHEYAISWNH LRIVFYVDNV PIRVYKNNEA RKVPYPRFQP MGVYSTLWEA
201: DDWATRGGIE KINWSRAPFY AYYKDFDIEG CPVPGPADCP ANSKNWWEGS AYHQLSPVEA RSYRWVRVNH MVYDYCTDKS RFPVPPPECS AGI

Arabidopsis Description

XTH7Probable xyloglucan endotransglucosylase/hydrolase protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8LER3]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.